Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00505 ATGGTGTGTGGTGGCACTTCCAGGGCGGAGGGCGTTGCCGATGATGATTTTGGCCGGCCGGAGAGAGCCACAGTTGGACTAGTTCGGTGGAGGCAAGGGTTGTCGTGGAAGGGATTCCACTCTCCTTGGGAATCCACTTGCCACGTAGCATACTCTTACACAGTCAACTCCTTCCTCACTATAAAGCCACACCACACTCCTTCCTTCTTCTTCAAAGCACCAACTCTTCAATTCCTATTCTACCTCTTCATCCGCCATTGTTGTCAATATCAAATGGCTGAGATTGAGGGCTCTCCTGGAAGCTCCATGCATGGAGTCACAGGAAGAGAGCAAACTTTTGTAGCCTCAGTTGCTTCTCCAATGGTCCCCACCGACACCACAGCAAAGTTTGCTCTCCCTGTAGATTCTGAACACAAGGCCAAGGTTTTCAAACTCTTCTCCCTCGCCAATCCTCACATGAGAACCTTCCACCTTTCTTGGATCTCCTTCTTCACCTGCTTTGTCTCCACCTTCGCAGCAGCCCCTCTTGTTCCCATCATCCGCGACAACCTCAATCTCACCAAAAGCGACATTGGAAACGCCGGCGTTGCTTCTGTGTCCGGAAGCATTTTCTCTAGGCTCGCAATGGGTGCAGTGTGCGACCTCTTGGGTCCTCGTTATGGCTGCGCCTTCCTCATCATGCTCTCCGCTCCTACCGTGTTTTGCATGGCCTTTGTGCAAGATGCTTCTGGGTATATAGCGGTTCGGTTTTTGATAGGGTTCTCCTTGGCCACGTTCGTGTCGTGCCAGTACTGGATGAGCACCATGTTCAACAGCAAGATCATAGGACTTGCAAATGGAACTGCGGCAGGGTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAACTTATCAGAAGAGCTGGGGCTACTCCCTTCACCGCTTGGAGGATTGCCTTCTTTGTTCCTGGTTGGTTGCATGTCATCATGGGGATCTTGGTCCTAACTCTAGGTCAGGACTTGCCTGATGGAAACCTTGGAGCCTTGCAGAAAAAGGGTGATGTAGCCAGAGATAAGTTTTCTAAGGTACTATGGTATGCCATAACAAATTACAGAACATGGGTTTTTGCTCTTCTCTATGGGTACTCAATGGGAGTTGAATTGACAACAGACAATGTCATTGCCGAGTATTTCTATGATAGATTTAATCTGAAGCTGCACACTGCTGGAATCATCGCTGCCTCGTTTGGAATGGCAAACCTAGTTGCTCGACCCTTTGGTGGGTATGTTTCCGATGTTGCAGCGAGGGTGTTTGGAATGAGGGGAAGATTGTGGACGCTTTGGATACTCCAAACCTTAGGAGGGGTTTTCTGTATTTGGCTCGGGCGTGCGAATTCTCTTCCTATTGCTGTCTTGGCTATGATATTGTTCTCTATAGGAGCTCAAGCTGCATGTGGTGCAACTTTTGGTATCATTCCTTTCATCTCAAGAAGGTCTTTGGGGATCATATCAGGTCTTACTGGTGCGGGTGGAAACTTTGGGTCTGGCCTCACCCAATTGGTTTTCTTTTCAACCTCGAAATTCTCCACTTCCACAGGTCTCTCGTTAATGGGAGCTATGATAGTGGCTTGCACTCTTCCTGTGACTCTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTACCTCCCTCAAAAGATGTCAACAAATCCACTGAAGAATTCTATTACACCTCTGAATGGAATGAAGAGGAGAGGCAGAAGGGCTTGCACCAGTCAAGTCTCAAGTTCGCCGAGAATAGCCGATCTGAGAGAGGAAAACGCGTCGCATCAGCCCCAACACCTCCAAATACAACTCCCACCCATGTCTAA 1866 0.4909 MVCGGTSRAEGVADDDFGRPERATVGLVRWRQGLSWKGFHSPWESTCHVAYSYTVNSFLTIKPHHTPSFFFKAPTLQFLFYLFIRHCCQYQMAEIEGSPGSSMHGVTGREQTFVASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMAFVQDASGYIAVRFLIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFVPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVARDKFSKVLWYAITNYRTWVFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLVARPFGGYVSDVAARVFGMRGRLWTLWILQTLGGVFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTSTGLSLMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVNKSTEEFYYTSEWNEEERQKGLHQSSLKFAENSRSERGKRVASAPTPPNTTPTHV 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00505 621 MobiDBLite consensus disorder prediction 581 604 - -
Vian11g00505 621 Gene3D MFS general substrate transporter like domains 355 557 IPR036259 -
Vian11g00505 621 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 92 607 IPR044772 GO:0015112
Vian11g00505 621 FunFam Nitrate transporter 2.1 356 557 - -
Vian11g00505 621 MobiDBLite consensus disorder prediction 581 621 - -
Vian11g00505 621 ProSiteProfiles Major facilitator superfamily (MFS) profile. 155 549 IPR020846 GO:0022857
Vian11g00505 621 CDD MFS_NRT2_like 156 549 IPR044772 GO:0015112
Vian11g00505 621 FunFam High affinity nitrate transporter 148 345 - -
Vian11g00505 621 SUPERFAMILY MFS general substrate transporter 150 550 IPR036259 -
Vian11g00505 621 Gene3D MFS general substrate transporter like domains 149 344 IPR036259 -
Vian11g00505 621 Pfam Major Facilitator Superfamily 160 516 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00505 Vian-Chr11 5009005 5012441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00505 92 621 Inorganic Solute Cotransporters AT5G60770 80.566 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00505 K02575 - gmx:547946 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00505 11 5009005 5012441 Vian11g00505 11 5009005 5012441 ECH
Vian11g00505 11 5009005 5012441 Vian5g01142 5 33498315 33500332 PCT