Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00501 ATGTGCAAGACAAAGATGGCGACCAACGCCTCAAGTCCCACTCCCACACCGCGATTACAACAACGCCCCACCCAAAGCCCAAGAACATCCTCCCCAAGGTCCACACTCAGGCCCAATCCTGGGCCCACCACTTCTTTCTCAGACAAACCCTCCACCTCTTACGCCTCCACCGCCAGCGCTCCCTACAGCGGCTCCACCGGCTACCGTCTCTCCTCCGACACCTCCATTGCCAGCCGCACCTCCCTCACCTCTCTCCGCGACACCCTCCCAGAAAACCCTCACATCTACGACTTCTCCGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGACACTCCTCCTCCACCCCCTGCTGGCGCTGCACTCTCCGCGGAGCAGACGTCATTGTCTTCCAGCGCAAGTTCATCCGCAAACTCCAGACGAATCAGCTCCAGCAACTGCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCTCCGTCTCCGGCGACCACATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACCCGCGCTTCACCGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACGGATCTCGCTCACGCACTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCACAACCGTATCAAATCCAGCGGCATCATCGTCACGGAACCTTCTTTCAACGCTAGGGTTTGCCATTTCGGCACCGCGCAGCTCTGCGGCGAAATCGACCTCGAAAACGAACAATTAGGCGAAATCAGTGAGATAGGGGAGAAATTTCCGCCGTCCCCAGCGAGGTCCAGGCAATTCGAGGGCGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTAGCGACTCAGAGGTCTGATATATACGCTTTCGGAGTGGTGTTGTTGGAGCTCCTCTCCGGGGAGGAGCCACTGAAGTTTAAATATGACGAGAAGACGCGCGAATTTTTGAGGACGTCGGTGATCGAGACGGCGAGAGGCGTGGTTGACGGCGGCGATGGTGGCGTGCAGGGGAAGCTGAGGAAGTGGGTTGATCAGAGATTGAAAGATTCGTTTCCCGTGGACGTAGCGGAGAAGCTGACACGTGTGGCACTGGAGTGCGTACACGTGGATCCAGATAAGCGACCGAACATGGGACAGGTGGCAGGGAAGATCTCGAAGTTTTATTTGAAGTCGAGGATGTGGTCGGACAGTATTAAGGTTCCTGATCTCACTGTTTCACTGGGTCCTCGTTGA 1311 0.5698 MCKTKMATNASSPTPTPRLQQRPTQSPRTSSPRSTLRPNPGPTTSFSDKPSTSYASTASAPYSGSTGYRLSSDTSIASRTSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGADVIVFQRKFIRKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFVNGASLSDCLRNKNNPRFTVLSTWMSRMQVATDLAHALDYIHNKTGLNINFVHNRIKSSGIIVTEPSFNARVCHFGTAQLCGEIDLENEQLGEISEIGEKFPPSPARSRQFEGVRGYMAPEFQASGVATQRSDIYAFGVVLLELLSGEEPLKFKYDEKTREFLRTSVIETARGVVDGGDGGVQGKLRKWVDQRLKDSFPVDVAEKLTRVALECVHVDPDKRPNMGQVAGKISKFYLKSRMWSDSIKVPDLTVSLGPR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00501 436 SUPERFAMILY Protein kinase-like (PK-like) 95 407 IPR011009 -
Vian11g00501 436 ProSiteProfiles Protein kinase domain profile. 95 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00501 436 Pfam Protein kinase domain 138 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00501 436 PANTHER OS09G0572100 PROTEIN 1 436 - -
Vian11g00501 436 MobiDBLite consensus disorder prediction 1 71 - -
Vian11g00501 436 Gene3D Phosphorylase Kinase; domain 1 70 179 - -
Vian11g00501 436 Gene3D Transferase(Phosphotransferase) domain 1 181 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00501 Vian-Chr11 4948503 4949813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00501 91 424 Receptor kinase-like Gene Family AT1G51940 31.953 2.38e-43 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vian11g00501 Pkinase 1.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00501 - - gmx:100792694 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00501 11 4948503 4949813 Vian11g00501 11 4948503 4949813 ECH