Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00491 ATGCTATTTCATACACACACAATGGAAAAGTTGGAATTGATGAAGCCTCAATTAAATGTTGCTGTGGCTCTAGTTATTAGCTTGCTCTGTATTCAGCATTCATTTTGTGATGAACTTTCTGATACTGGACCAAACAAGTGGAAATGTAGATGCTCTTTATTACAAGGGAACCATACATACTCTCGTGCTAATTGTTCCAAATCATGTGATTGTCATTCAGATGCTGAACAGAGTGCATCCATATGGACATGCTTATGTGATTCGAATGGGTTTCCTGAAGTGTCAGCAGATGGCCATAACCTTAACTGTTTTGATGCCTGCAATTGCACATGGGGATCTCTCAGGATGCCACTTGGTTCAAAGAAGCAAATTTCGAGCAAGATTGTAGTAGTTATTCTATCAGTATGTGCTACATGCACAACTATTGCATTTCTTGCCTCAGTTGTATGTCAGGTCTGCCGAAGGGAGAGATGTTCTATTCAATCACCAATGATCTCATCAGATAAAGAAACAAGTTACAGTAGCACCACCAACTTATTCAGTCATAAGACTTCTTCGCCTGTTAGTCATATTACAGGATGCTTTCAGAAGTCCTCTTTGTTGTTTGGTAGCCAAAGACAAACCTTTTATGGAAATATTATTCAATTTTCATTTGCTGAACTGGAAAATGCCACCGAAAACTTTTCAACTTCCAATCTAACTGGACTAGGTGGAAGCAGTTATGTATACCGTGGTCGGCTGAAAGATGGCAGTAATGTGGCAGTCAAGAGACTGAAAGATCAAAGAGGGCCTGAGGCAGACTCTGAATTTTTTACAGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTAGTGGGATACTGCTCAGAACTAAAAGGAAAAAATGTTCAAAGGTTGCTAGTGTTTGAATACATGACTAATGGAAATTTGAGGGACCGCTTAGACGGAGTTTTTGGAAAGAAAATGGACTGGTCAACTCGAGTTAGAATTGCATTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCTAGAATTCTGCACAGAGATGTCAAATCAACAAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTCGGTATGGCTAAAAGCTTGAGAGCTGATGACCATCCCAGTCGTTCAGATTCTCCAGCAAGAATGCAGGGAACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAGTCTGATGTCTTCAGTTTTGGAGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAACCCATCCACAAATCTGCAGGCAAAGAACAAAGTCTTGTTATATGGGCAAGTCCTCGCTTAAAGGATAGCAGGCGAGTAATAACCGAGTTGGCTGATCCACAGTTGAAAGGAAACTTCCCAGAAGAAGAGCTGCATATAATGGCATACTTAGCTAAGGAGTGCTTGCTGTTGGATCCTGACACTCGGCCAACTATGACTGAAGTTGTTCAAATTCTTTCCGGTATCTCCCCAGACAGATCTAGAAGGAGAAGAAACATTCCAGTGAGATTTTTTCAGGAACCGGAGGACTTGGAGAATCAAAGGCAAGCTCCACCAAGTATATTTCCAACTTGTAATTTATTGCCGTTAGGTGTTGACCACAATCTTAATGTTGGCAATGAAGATAAAGATGCACATACATTTTCAAGTGGGGATATGGAGAGTTTGATCCTCTTTAGTCCAAAGGGTGAGAACTGGCATGCATCAGAGGAGGAAATGGTAGATTTAACTGAGCCTCGTTTCGAATCATTTTTCATGACAAACCCCAATTTCTCTTGA 1842 0.4104 MLFHTHTMEKLELMKPQLNVAVALVISLLCIQHSFCDELSDTGPNKWKCRCSLLQGNHTYSRANCSKSCDCHSDAEQSASIWTCLCDSNGFPEVSADGHNLNCFDACNCTWGSLRMPLGSKKQISSKIVVVILSVCATCTTIAFLASVVCQVCRRERCSIQSPMISSDKETSYSSTTNLFSHKTSSPVSHITGCFQKSSLLFGSQRQTFYGNIIQFSFAELENATENFSTSNLTGLGGSSYVYRGRLKDGSNVAVKRLKDQRGPEADSEFFTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFEYMTNGNLRDRLDGVFGKKMDWSTRVRIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKSLRADDHPSRSDSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEQSLVIWASPRLKDSRRVITELADPQLKGNFPEEELHIMAYLAKECLLLDPDTRPTMTEVVQILSGISPDRSRRRRNIPVRFFQEPEDLENQRQAPPSIFPTCNLLPLGVDHNLNVGNEDKDAHTFSSGDMESLILFSPKGENWHASEEEMVDLTEPRFESFFMTNPNFS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00491 613 Pfam Protein kinase domain 232 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00491 613 ProSiteProfiles Protein kinase domain profile. 228 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00491 613 SUPERFAMILY Protein kinase-like (PK-like) 208 507 IPR011009 -
Vian11g00491 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Vian11g00491 613 CDD STKc_IRAK 235 510 - -
Vian11g00491 613 FunFam receptor-like serine/threonine-protein kinase NCRK 309 519 - -
Vian11g00491 613 SMART serkin_6 228 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00491 613 Gene3D Transferase(Phosphotransferase) domain 1 309 525 - -
Vian11g00491 613 PANTHER OS01G0750732 PROTEIN 74 515 - -
Vian11g00491 613 FunFam receptor-like serine/threonine-protein kinase NCRK 202 308 - -
Vian11g00491 613 Gene3D Phosphorylase Kinase; domain 1 201 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00491 Vian-Chr11 4786064 4790333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00491 14 609 Receptor kinase-like Gene Family AT2G28250 52.138 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Vian11g00491 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00491 - - gmx:100499641 1035.4