Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00464 ATGGAGGGAGATCAACTGGGCTCTGGTTACTCTTTTCCACCTGGCTTCAGATTCCACCCTTCTGATGAAGAACTCATAGTTCATTACTTGCGAAACAAAATCTGTTCACGTCCACTTCCAGCATCTATTATAGCTGAGATAGATCTCTACAAGTATAACCCGTGGGAGCTACCCAATAAGTCTTTGTTTGGAGAAGAAGAGTGGTATTTCTTTAGCCCAAGAGACAGAAAGTACCCAAATGGATTGAGACCAAACAGGGCAGCAGCCTCAGGATACTGGAAGGCAACAGGAACTGACAAGCCAATTCTTTCATCCAGTGGATCAAAGCGCATAGGAGTGAAGAAAGCTCTGGTGTTTTATTCAGGTCGACCTCCTAAGGGATCTAAGACGGATTGGATCATGAATGAGTATAGATTGATTGATACAATTACCAAATCCCCCAGGCTAAAAGGCTCCATGCGGTTGGATGACTGGGTACTATGCCGGGTTCGACATAAAGGCTACTCTTCGAAGATATCAGGTGAAAATCAAGAGAATCCTAGTGAACTAAACCTCTCTGCAAAACTACCGAGGAGTGAAGGATATCCAACAAACATGAACTGTCGGGCTGACATGATCACTGATTATCAATACAAAGACTATCAGATCATAGCCTCTATTCTTGTTGGTGCACCTGTATCTCCCACTGAAAACATGCCAAATATGAGCTTTAAGGGCTGCAAAGGCACCAATCTAGTTTCAGTTTTTGAAGATGGTTTCACTAAAGTGAATTCTCAAATGACATTTCCTTCTTTGGACAGTTACTTCAACCCACTGACAAGAAAATCCAATGAAGATGAACAGTATGGAAATCTCATCTCTTTTAACAGGAAGTTCAACGCTGAGGACAAAATGGACGAATCACCTAGCAAGGTGTTGGCCAGTAGAGAATTGAACTGCTATAACCAAAGCCAGTCTGAAGATGACATTTTCAGCGGGAACCCACCAGACACTGGCATCAATTTTCAAGAGCTTAACGATTTAGTCTTTACAGGAAGGTACCCTCAGTGA 1050 0.4267 MEGDQLGSGYSFPPGFRFHPSDEELIVHYLRNKICSRPLPASIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSSGSKRIGVKKALVFYSGRPPKGSKTDWIMNEYRLIDTITKSPRLKGSMRLDDWVLCRVRHKGYSSKISGENQENPSELNLSAKLPRSEGYPTNMNCRADMITDYQYKDYQIIASILVGAPVSPTENMPNMSFKGCKGTNLVSVFEDGFTKVNSQMTFPSLDSYFNPLTRKSNEDEQYGNLISFNRKFNAEDKMDESPSKVLASRELNCYNQSQSEDDIFSGNPPDTGINFQELNDLVFTGRYPQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00464 349 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Vian11g00464 349 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Vian11g00464 349 FunFam NAC domain-containing protein 72-like 21 171 - -
Vian11g00464 349 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
Vian11g00464 349 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Vian11g00464 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00464 Vian-Chr11 4433002 4435120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00464 5 177 NAC Transcription Factor Family AT1G69490 65.896 3.70e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vian11g00464 NAM 2.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00464 - - vra:106759457 707.983