Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00414 ATGACACCCCAGGAAGAAAGACTCGTGCTTGAGCTTCACTCAAAATGGGGAAATAGGTGGTCAAGGATCGCTCGCAAGTTACCAGGGCGCACTGACAACGAGATCAAGAACTACTGGAGGACTCTGATGAGGAAAAAGGCTCAGGACAAAAAAAGAGGAGAAGCTGCATCATCATCAACACCGACAAAACCTTCTTCCAGTGTTCATTCCTCAATATCAGTATCCTCAAAGAAGCATGAAGTGGATCCACACGCTTCAAAAAAGGCAGGAGAAGAGAGCTTTTACGACACAGGAGGAGCTTCAACTCAAGATGAAGGTGAAGGTGAGTTCTCAATGGATGATATATGGAAAGATATTGACATGTCAGAAGAGAACAACAGTTTTGTTTATGGAGAGAGTGAAGAGGGTTGCAACCCATCTGCATCATCGTGGGAGTATTGTTATGACCATCTGTGGGTGATGATGGATGAGGAACCATATTTTTATGCATTAAGCGGCTAA 501 0.4411 MTPQEERLVLELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQDKKRGEAASSSTPTKPSSSVHSSISVSSKKHEVDPHASKKAGEESFYDTGGASTQDEGEGEFSMDDIWKDIDMSEENNSFVYGESEEGCNPSASSWEYCYDHLWVMMDEEPYFYALSG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00414 166 ProSiteProfiles Myb-like domain profile. 1 43 IPR001005 -
Vian11g00414 166 SMART sant 1 45 IPR001005 -
Vian11g00414 166 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 101 IPR044676 GO:0003700|GO:0006355|GO:0043565
Vian11g00414 166 FunFam MYB transcription factor 1 77 - -
Vian11g00414 166 MobiDBLite consensus disorder prediction 34 53 - -
Vian11g00414 166 Pfam Myb-like DNA-binding domain 2 42 IPR001005 -
Vian11g00414 166 Gene3D - 2 88 - -
Vian11g00414 166 MobiDBLite consensus disorder prediction 75 91 - -
Vian11g00414 166 MobiDBLite consensus disorder prediction 34 109 - -
Vian11g00414 166 CDD SANT 1 43 IPR001005 -
Vian11g00414 166 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Vian11g00414 166 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 47 IPR017930 -
Vian11g00414 166 MobiDBLite consensus disorder prediction 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00414 Vian-Chr11 3887738 3888469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00414 1 154 MYB Transcription Factor Family AT3G46130 50.303 6.91e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian11g00414 Myb_DNA-binding 4.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00414 K09422 - gmx:100775900 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01280 5 35557611 35558651 Vian11g00414 11 3887738 3888469 PCT