Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00391 ATGGGAAAGGACCTGATTTCTTCCGACCAGACCGCTATTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCCCACAAAAGGAGAAGACATGCCACATATAAGAGAAAAAGCATTTTGTATAACCAACTTGATGACCAACACGATGGAGTTACAGAATCGGAGCCCCTCCTGGTCAGACAAGAAAGCGAAAAATTGCATGCTGCAGGCAAAAGTTCTCCCAACTACAATCAAAAGGAAACACGAACTGGGAAAGAGTTTAACAAAGAAAACTCCAAAGGCAGTGAAACCATGGACTACTCGAGGAAAAACCAGGCCAGTAAGGAGTATGCACTTCATCTGGAAAAAAATGGCAAGACAACAGAAGCTTACCTTAACCATAAGCCTACGGAAACAAACAAGCATAATGGAGACATTTCCTATAAATTTGAGAAACATTCAGATGTTTTTGAGTTTCTTAGGGTGGAGAAGGATTTATTACTCAAATTTCTACGAGACATGGACTTCAGTGGGAAAAAACTCCAGCAACCTTCCCAAACCAATGCAAGATTGACAAAATGTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGGAACATTAGCTCTAGGTCGTTAAAACACAAGCAAAACGAAATTTATCCAAAGGGAGAAAAATTGTTTGCTGTTGCCCAGGAATCAAACATGTCAGTTTCCAGTTTTGTGAAAGATATTTCTTATGAGAAGCCACGAACTTTGGTGAGTGATCTTGGTGTTGATAGTGCCATGAAACAAAAAGCAATTATTTCTTCAAGGTCTTCTCATGAATCAAATCACAGAGGGTGGAATCAGTTGGTTCTTCATCAATTCAAAGCTATAAAGCAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTGGTAAACAAACTTCTGCTGAAGCTATCCAACACAGAGCTTCGCCTGAATATAGCATAATCAATAATGAGGAAGAGATCTCACAAAGTTTAGAAGATGGCGTGGTTCAAGAATACAAAAGGAGCAAAAGCTCAAATGAAACTAAAGCTTCTGATTATGATTCCAACAAACATGATGCCCGGCTCATGCGGAGAACATCTTCTCTCAATGAATCATTGGATAGATATACTCAGTTGTTCGAGAAAAGCTTCAGCAAAGAAGCCAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACACACGAGGATAGGATCCACAAGAGTGCACATGTTCCTAACTTTTCAAGAAGCAATTTGTCTATGCCTAATCTCGAGACTTTAGGCTTCCTTGTACAAGAGGTACTTTTTGATACAAATGATGTAGGGAATACCGAGGAAACATACGATCGTGCTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATGGACAAATCACTCGATAATTTTAAAGAGGTTGAAATTGTGGAAACAGATAAGATTTTGGAGAAAATTGATGAAGTTACCTGTGACCAAAAGGAGGACATGGATGAGGCAGCAGTGGGGGAAGGAAGTTTTACACAAGAAATAGAGAAAATGAGTAATATGACTGCCTATCTTAGTAAGGAGGTGATGCCAACTCTTGAAACTGCCTGCGAGGACAATATAACCAGCCACAAAGAAGGCACAGAATTGTATACCCAAGTCTCTACATTGGAGGAATTGGAAGGTGATTTATCAGATAAAGGAAGTGCATGGCCAGACTCTTCATACAACAGAAATGCAAGTGGAATAACAGCTGAAGATACAGATTACCCTTCCAATTTCAAATATTTAAAAAATGTTCTTGAATTTTCGGGATTCTTGGGAAATGAGCACACTCAGATGAGATACACAATAGACCAGCCACTAAAGCCCTCCTTGTTCAAAGATTTGGAAGCGAGTTTGCGGCATGAAATAGAAACCTCTGAAGAAGAGACAACCAAACATTATGATCACCAACTCATTTTTAACTTAGTGAACGAGGTGCTGCTGGAAATTTATGGAAGGTCACCAACTTACTTCCCAAGACCATTCTCCTTCAACCCCCGCCTCCATCCAATGCCTAAAGGGCACTATCTTCTGAATGAAGTGTGGACTAGTGTTAATTCATACCTGACCTTGAGACCTGAGCTAGATCAGACATTAGATGATGTTGTGGGTCGTGATTTGGCACAAGGAAGAGGGTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGCACTTGAACTAGAAGAGATGATAATGGATGATTTGTTTGATGAATTTATCTTCTCATGA 2307 0.3979 MGKDLISSDQTAIQIQDNNPGCMWGMLKILDYHRWRVKKVFPHKRRRHATYKRKSILYNQLDDQHDGVTESEPLLVRQESEKLHAAGKSSPNYNQKETRTGKEFNKENSKGSETMDYSRKNQASKEYALHLEKNGKTTEAYLNHKPTETNKHNGDISYKFEKHSDVFEFLRVEKDLLLKFLRDMDFSGKKLQQPSQTNARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEKLFAVAQESNMSVSSFVKDISYEKPRTLVSDLGVDSAMKQKAIISSRSSHESNHRGWNQLVLHQFKAIKQKIKHALVEFRKSGKQTSAEAIQHRASPEYSIINNEEEISQSLEDGVVQEYKRSKSSNETKASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWQSSKSKSLKLTHEDRIHKSAHVPNFSRSNLSMPNLETLGFLVQEVLFDTNDVGNTEETYDRAHRKSVSLPLKMDKSLDNFKEVEIVETDKILEKIDEVTCDQKEDMDEAAVGEGSFTQEIEKMSNMTAYLSKEVMPTLETACEDNITSHKEGTELYTQVSTLEELEGDLSDKGSAWPDSSYNRNASGITAEDTDYPSNFKYLKNVLEFSGFLGNEHTQMRYTIDQPLKPSLFKDLEASLRHEIETSEEETTKHYDHQLIFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHPMPKGHYLLNEVWTSVNSYLTLRPELDQTLDDVVGRDLAQGRGWMILQEEEEYVALELEEMIMDDLFDEFIFS 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00391 768 MobiDBLite consensus disorder prediction 99 120 - -
Vian11g00391 768 MobiDBLite consensus disorder prediction 353 375 - -
Vian11g00391 768 Pfam Domain of unknown function (DUF4378) 605 764 IPR025486 -
Vian11g00391 768 PANTHER PROTEIN TRM32 1 768 IPR044257 -
Vian11g00391 768 MobiDBLite consensus disorder prediction 82 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00391 Vian-Chr11 3642779 3645762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00391 165 758 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.492 2.47e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00391 - - vum:124834749 1504.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00391 11 3642779 3645762 Vian11g00391 11 3642779 3645762 ECH