Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00376 ATGATGCTCTGTTCCATGGAGAAACTTGATGCAGTGATGGAGTTTTGGGTGGATCAACTTGGATGGGATAGTTCTGTGTTTATTGCGTACCCTTGGTTGTTTAGGTACAATTTGGAGAAAGGACTCGTTCCGAGGGCTTTGGTTCTGCAGCATCTTCTCTCCAGAGGATTGGTGAAGAAGGATGCTAGCATCTTCACACCATTACGCAGATGA 213 0.4554 MMLCSMEKLDAVMEFWVDQLGWDSSVFIAYPWLFRYNLEKGLVPRALVLQHLLSRGLVKKDASIFTPLRR 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00376 70 Gene3D Transcription termination factor 3, mitochondrial 1 69 IPR038538 -
Vian11g00376 70 Pfam mTERF 2 66 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00376 Vian-Chr11 3479917 3480129 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vian11g00376 mTERF 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00376 K15032 - var:108336607 92.8189