Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00375 ATGCTTTCCACCAATTCTCTTGTGCAAAATATTGGGGGTACTATCTCTGTGTTTTCGGATCAGAACCAAGTGACGGAGGGGATTGAGTTAGATGATTCATCTTCTTCTTCGGGTACAAGCTCAAGTGGAGAATCGACAAAGTACTCCAACAACATCCTGAGATACATAAGCGACATCCTCATGGACGAGGAAGACGACCTGTTAAACAAACCTTGCATGTTGCAGGAATGTTTGCGACTCCAGGCTGCTGAAAAGTCATTCCTTGATGTCCTTGTCCATCACAGCCACCCTTCTTCCAGTGGTGAAAGCATTGGCATCGCAGATTCTGATGAAAATTTTGGTCGCACTGTTAGTTTTGAGAGCAATGGCAGCTGCGTCACTGATAATTCATGTGACTGTGACTTGGTCCATGGCGTAGGTGAATTTGACTCTTCTTTCTTACCACAGCAAACCCATCTAGTTTATTCCCCAGATGTAGTTGATGCATTTAGGGTTCGTGATGGAACCTGGAATCTCTTTCAGTCTCATACGAAGCCGTTTATGGTGGAAGAGGGTCGTTCAACTTCAGCATCCAGAGAAAAGAGAAGCCATGAGCTGGATGATGATGCTGGTCTTGAACAAGATGGAAGAAGAGGCGCCAAGGTTTCAGCGGTCTTTTCTGGCGAGTCAGAGTCACCAGAGATCTTAGATGAGGTGCTGCTTTATCAAATTGGAAGAAGTGGATGTTCTTCTGAACCATCACAGGGTGTTGATTTAGGAGGGTCCAATGGAAAGGGAGCACGCTCACGTTCAAAGAAGGGGTCCACCAAAGCAGGTACAGCGGTAGATTTATGGACCCTTCTAACTCAATGTGCACAAGCAGTGGCAAGCTTTGACCAAAGGAATGCAAATGACTTACTCGGCCAGATTAATCAACACTCTTCACCTTTTGGGGATGGACTCCAGCGATTGGCTTATTACTTTGCCAAGGGCCTTGAGATAAGGTTGGCTGCTGGGACCCCATCATACGTGCCACTAGAAGTAGCAACTGCTGCTGATATGTTGAAAGCTTACAAACTATTTGTCACATCCTCTCCTTTGCAAAGGATGTCAAATTATTTGACAACCAGGACAGTCATTAGTCTTGTGGAAAATGAGAGCAGTGTTCACGTTATTGACTTTGGCATTTGCTATGGTTTTCAGTGGCCCTGCCTTATCAAGAGGCTGTCAGAAAGAGATGGTGGTCCTCCAAGGCTGCGTATAACAGGAATTGATCTTCCTCGGCCAGGATTTCGGCCTGCGGAAAGGGTTGAGGAGACAGGGCGGCGTTTGGCAAACTACTGCAAGAAGTTCAATGTCCCTTTTGAGTACAACTGCCTTGCACAGAAATGGGAGACTATAAAACTTGCAGATCTCAAGATAGACAGAAATGAAGTCACCGTTGTTAGCTGTTTCTACCGGCTGAAGAACCTGCCTGATGAAACTGTGGCAGTGAACAGTCCAAGAGATGCTGTGTTAAAGTTGATTAGGAAGATCAATCCAAACATTTTCCTCCATGGGGTGGTCAATGGCACTTATAGTGCTCCTTTTTTCTTGACACGGTTCAGGGAAGCGCTGTACCACTTCTCATCACTGTTTGATATGTTTGAGGTTAATGTGCCACGTGAAGATTCGCAAAGGTTGATGTTTGAGAAAGGGCTGCTTGGAAGGGATGCCATCAATGTTATAGCGTGTGAGGGTGCAGAGAGAGTTGAGAGACCTGAGACTTACAAGCAGTGGCAGGTTAGGAACCTGAGAGCTGGGTTCAAACAAGTTACTTTTGATCCTCAGCTGGTGAATTATGCGAAACAAATGGTGAAGAAGGAATATCACAAAGATTTTGTGGTGGCTGAGGATGGGAAGTGGCTTTTGCAGGGATGGAAAGGGCGAATTCTGAATGCCATTTCTGCTTGGACTCCTGCTTGA 1944 0.4578 MLSTNSLVQNIGGTISVFSDQNQVTEGIELDDSSSSSGTSSSGESTKYSNNILRYISDILMDEEDDLLNKPCMLQECLRLQAAEKSFLDVLVHHSHPSSSGESIGIADSDENFGRTVSFESNGSCVTDNSCDCDLVHGVGEFDSSFLPQQTHLVYSPDVVDAFRVRDGTWNLFQSHTKPFMVEEGRSTSASREKRSHELDDDAGLEQDGRRGAKVSAVFSGESESPEILDEVLLYQIGRSGCSSEPSQGVDLGGSNGKGARSRSKKGSTKAGTAVDLWTLLTQCAQAVASFDQRNANDLLGQINQHSSPFGDGLQRLAYYFAKGLEIRLAAGTPSYVPLEVATAADMLKAYKLFVTSSPLQRMSNYLTTRTVISLVENESSVHVIDFGICYGFQWPCLIKRLSERDGGPPRLRITGIDLPRPGFRPAERVEETGRRLANYCKKFNVPFEYNCLAQKWETIKLADLKIDRNEVTVVSCFYRLKNLPDETVAVNSPRDAVLKLIRKINPNIFLHGVVNGTYSAPFFLTRFREALYHFSSLFDMFEVNVPREDSQRLMFEKGLLGRDAINVIACEGAERVERPETYKQWQVRNLRAGFKQVTFDPQLVNYAKQMVKKEYHKDFVVAEDGKWLLQGWKGRILNAISAWTPA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00375 647 ProSiteProfiles GRAS family profile. 268 645 IPR005202 -
Vian11g00375 647 MobiDBLite consensus disorder prediction 242 268 - -
Vian11g00375 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 213 638 IPR005202 -
Vian11g00375 647 MobiDBLite consensus disorder prediction 187 209 - -
Vian11g00375 647 Pfam GRAS domain family 279 645 IPR005202 -
Vian11g00375 647 MobiDBLite consensus disorder prediction 181 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00375 Vian-Chr11 3469145 3471088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00375 52 647 GRAS Transcription Factor Family AT5G59450 44.224 1.19e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vian11g00375 GRAS 3.3e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00375 - - aprc:113855970 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00375 11 3469145 3471088 Vian11g00375 11 3469145 3471088 ECH