Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00351 ATGGAGTACTCTGTGGAATCTTTGGGAAGAGATCTTAAGAACGTGAGGAAGTACTTCGGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTTAAACGGTTGCACAGTTTTCTAGTTGAAAGAGAGCAAGAAATTTTGAATGCCCTCAAGCAAGATTTGGGGAAGCATTGCGTTGAGGCCTTCAGAGATGAGGTAGGAACGTTGGTGAAGACCTTAAACTACGCCATAAAGCATTTGAAAAAATGGATGGCGGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCCAGTGCTGAGATAGTTCCTGAGCCACTCGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCTTTTGGACTGTCCTTGGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACACTGCAGTTCTGAAGCCTTCCGAGATGTCCCCTACTTGCTCTTCTCTTTTAGCCACCGTCCTTCCAACTTACTTGGACAACAATGCCATTAAAGTCATCCAAGGTGGACCAGAAGTGGGAGAGCTACTCTTACAGAAAAGATGGGATAAGATTTTCTTCACAGGAAGTGAAAGGGTGGGAAGAATTGTTATGTCTGCTGCAGCTGTGCATCTTACTCCAGTGACTTTGGAGTTGGGTGGAAAATGTCCGGCACTGGTTGATTCTCTTACTTCTTCTTGGGACAGAAAGGTGGCTGTGAAACGAGTTTTGGTGGCAAAATTCGGGGCTTGTGGAGGACAAGCGTGCATAGCAATCGATTATGTTCTTGTAGAGAAGAGTTTCAGTTCTACATTGGTGACATTGATGAAGGATTGTATTAAGAAAATGTTTGGAGAAAATCCTAAAGAGTCGAACACTGTTGCAAGGATAGTTAATGAGAAACATTTCATGAGACTGAAGAACCTTCTCACTGATCCAAGGGTGAAAGAGTCGGTGGTTTTTGGAGGTTCAATGAACGAAAATGACTTATTTATTGAACCGACAATATTGTTGGATCCTCCACTTGATTCAGCAATCATGGCTGGGGAAATCTTTGGTCCGGTGCTTCCAATTATCACTCTGGAGAAGATTGAAGACAGTGTCGAGTTCATAAGCTCAAGGCCTAAACCATTAGCAATCTATGCCTTCACGAAAAACCAAACTCTGCAGAGAAGAATGGTATCTGAAACATCATCCGGAAGTCTTGTTTTCAACGATGCAATTCTACAGGTACGATCGTCATCGTGCCTGTCGTTCGTTCCGTTCGACAGGGTCGCTCGACATCATGACTGTCGCTCTCATTGGTCGACAGGAACGCTCGTCCGAGTGCCTGTCGATCACACTGCTCGACAGGAACGCTCGTCCTTTGACGCTCGTCCTTTACCCTATCGTTCGTACGATCGTCATCGTGCCTGTCGTTCGTTCCGTTCGATAGGGTCGCTCGACATCATGACTGTCGCTCTCACTGGTCGACAGGAACGCTCGTCCGAGTGCCTGTCGATCACACTGCTCGACAGGAACGCTCGTCCTTTGACGCTCGTCCTTTACCCTGTCTACGTAGCGGATACCCTACCATTTGGAGGAATTGGGGAAAGTGGGTTTGGCAAGTACCATGGGAAGTTTTCCTTTGACGCGTTCAGTCACCCTAAGGTCGTGGCCAGAAGAAGTTACTTCACTGATTTTTGGTACAGATTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGTGTCTTACAATTTGGATTATCTTGGAATACTTCTAGTTCTGCTTGGCTTAAAGAAGTCAAAACGGTCCTTATTTTATGCTTGTAATTGA 1809 0.4561 MEYSVESLGRDLKNVRKYFGSGKTKEASWRESQLKRLHSFLVEREQEILNALKQDLGKHCVEAFRDEVGTLVKTLNYAIKHLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTAVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIQGGPEVGELLLQKRWDKIFFTGSERVGRIVMSAAAVHLTPVTLELGGKCPALVDSLTSSWDRKVAVKRVLVAKFGACGGQACIAIDYVLVEKSFSSTLVTLMKDCIKKMFGENPKESNTVARIVNEKHFMRLKNLLTDPRVKESVVFGGSMNENDLFIEPTILLDPPLDSAIMAGEIFGPVLPIITLEKIEDSVEFISSRPKPLAIYAFTKNQTLQRRMVSETSSGSLVFNDAILQVRSSSCLSFVPFDRVARHHDCRSHWSTGTLVRVPVDHTARQERSSFDARPLPYRSYDRHRACRSFRSIGSLDIMTVALTGRQERSSECLSITLLDRNARPLTLVLYPVYVADTLPFGGIGESGFGKYHGKFSFDAFSHPKVVARRSYFTDFWYRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKKSKRSLFYACN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00351 602 SUPERFAMILY ALDH-like 514 572 IPR016161 GO:0016491
Vian11g00351 602 FunFam Aldehyde dehydrogenase 16 220 - -
Vian11g00351 602 Pfam Aldehyde dehydrogenase family 18 404 IPR015590 GO:0016491
Vian11g00351 602 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 513 577 IPR016162 GO:0016491
Vian11g00351 602 FunFam Aldehyde dehydrogenase 217 423 - -
Vian11g00351 602 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 216 IPR016162 GO:0016491
Vian11g00351 602 SUPERFAMILY ALDH-like 13 407 IPR016161 GO:0016491
Vian11g00351 602 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 410 IPR016163 GO:0016620
Vian11g00351 602 PANTHER ALDEHYDE DEHYDROGENASE 515 583 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00351 Vian-Chr11 3310299 3318657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00351 515 592 Aldehyde Dehydrogenase Gene Family AT4G36250 47.436 1.64e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00351 K00128 - gmx:100798020 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00351 11 3310299 3318657 Vian11g00351 11 3310299 3318657 ECH
Vian11g00351 11 3310299 3318657 Vian5g01361 5 36215869 36218225 PCT