Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00344 ATGATGATTGATAAACAACAGCACCCAAGGATCGAGCAAAAGCTTGCTGGCCAGCTTCACTTGAGATCCAACTCCAACCTTTCCCCACATGTTGGAAAAAGGCTAGCTCTGTTTCAGCAGCGATTCTCACTAGCAAATTATTCAAATGCAGGGTTACAGTTCCCTCTCATGCCTGCGTGCAAGCCCACAAACTACATGCATTCTGCAGGTTCACCAGTGTTCATCCCATCGCCTTCGGAGAAAAACTGGGGAAGGTTTGCCACTGATTTTCTCATGGGTGGAGTTTCTGCGGCAGTGTCCAAGAGTGCAGCTGCTCCGATTGAGCGTGTAAAGCTTCTCATTCAAAATCAGGATGAGATGATCAAAGCGGGCAGGCTCTCTGAACCCTACAAGGGCATTGGAGATTGCTTTGGAAGAACAATCAAAGATGAAGGGTTTGTTTCATTGTGGAGAGGGAACACTGCTAATGTTATCCGTTACTTCCCAACACAGGCCTTGAATTTTGCATTTAAAGACTACTTTAAGAAGCTGTTCAACTTCAAGAAAGACAGGGATGGATACTGGAAATGGTTTGCAGGGAACGTAGCATCTGGTGGTGCAGCAGGAACCGTGTCTTCAGTGTTTGTATATTCATTGGATTACGCTCGAACCCGCCTTGCCAGTGATGCCAAGGCTGGAAAGAAGGGTGGAGAGAGGCAATTCAATGGCTTGATCGATGTGTACAGGAAGACTATTCAATCAGACGGTGTTGCTGGCCTCTACCGTGGCTTCAACGTATCTTGCGTTGGAATCATTGTCTACCGTGGTTTATACTTTGGCATGTATGATTCTCTGAAACCAGTGGTCTTGGTGGGAACTTTGCAGGATAGTTTCTTGGCTAGCTTTGCTCTGGGGTGGCTGGTTACTATCAGTGCAAGCATTTCCTCGTACCCCTTGGATACGGTTCGCAGAAGAATGATGATGACATCGGGTGAAGCTGTGAAGTACAAAAGCTCTTTGGATGCATTCTCGCAAATCGTGAAGAATGAAGGTTCAAAATCTCTCTTCAAGGGTGCCGGCGCAAACATCCTTCGTGCAGTTGCAGGTGCTGGTGTGCTTGCTGGTTATGACAAACTTCAGTTACTTGTTCTTGGAAAGAAGTATGGTTCTGGTGGGGCTTGA 1161 0.4677 MMIDKQQHPRIEQKLAGQLHLRSNSNLSPHVGKRLALFQQRFSLANYSNAGLQFPLMPACKPTNYMHSAGSPVFIPSPSEKNWGRFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFVSLWRGNTANVIRYFPTQALNFAFKDYFKKLFNFKKDRDGYWKWFAGNVASGGAAGTVSSVFVYSLDYARTRLASDAKAGKKGGERQFNGLIDVYRKTIQSDGVAGLYRGFNVSCVGIIVYRGLYFGMYDSLKPVVLVGTLQDSFLASFALGWLVTISASISSYPLDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGA 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00344 386 Gene3D Mitochondrial carrier domain 87 382 IPR023395 -
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 204 222 IPR002067 GO:0055085
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 152 172 IPR002067 GO:0055085
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 254 272 IPR002067 GO:0055085
Vian11g00344 386 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Vian11g00344 386 Pfam Mitochondrial carrier protein 83 181 IPR018108 -
Vian11g00344 386 Pfam Mitochondrial carrier protein 188 281 IPR018108 -
Vian11g00344 386 Pfam Mitochondrial carrier protein 290 376 IPR018108 -
Vian11g00344 386 SUPERFAMILY Mitochondrial carrier 84 371 IPR023395 -
Vian11g00344 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 189 281 IPR018108 -
Vian11g00344 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 375 IPR018108 -
Vian11g00344 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 177 IPR018108 -
Vian11g00344 386 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 79 385 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 PRINTS Adenine nucleotide translocator signature 294 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 PRINTS Adenine nucleotide translocator signature 130 151 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 PRINTS Adenine nucleotide translocator signature 189 202 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 PRINTS Adenine nucleotide translocator signature 163 175 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vian11g00344 386 FunFam ADP,ATP carrier protein, mitochondrial 87 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00344 Vian-Chr11 3242196 3244094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00344 2 386 Antiporters AT5G13490 73.469 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00344 K05863 - gmx:100800843 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00344 11 3242196 3244094 Vian11g00344 11 3242196 3244094 ECH