Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00328 ATGTTCCAGTGGTCATTTAGGACATTGGAGTTCAGTTTTATGTGTCCAGTGATTAGTGGTGACCAAGTTAGCCTACACTTTTTAAGTTCAAATTTGTACCCTTTTAACCAATCCAAGAGATTTTTTTATATAATAAAGAATCTTGTGATTAATGGTCATGAGTTGAACTGCAGTTCGGATTTAGAAGTTGATGATATTAGATGCCCCAATATAGCAGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGCGGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTAAAGGAAAGACAGAAGCTGGCGATTCAGCAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCCACTGATCAAGCTCGTAGGAAGAAAATGTCAAGAGCACAGGATGGGATTCTGAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTATACGGGATCATTCCTGAGAAGGGAAAGCCGGTTAGTGGTTCCTCTGATAACATTAGAGCATGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATAGCCAAGTATGAAGCTGAGTGTCTTGCTATGAGTGAGGCCGATAACAGCCGAAATGGTAACTCGCAGAGCATTCTCCAAGACCTGCAAGATGCAACACTTGGATCACTTTTGTCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTGTACCTCCACCATGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGGCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTCACTGCTGTTATAAAGCACATGTCACCTAATATTGCAAAGATAAGGAGGCATGTTCGGCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTGAGTCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGACAATGGTACATCTGGAGTAACTGGAATGCTACCTGGTGTTCCTGCTGAGAATAAGCAAGCTGCTACTAGTAGTGCAAGCAACTATGATGTCGATGGTACTGATGATGGCATTGGTTCTGTTTCGTCTAAAGAGGATAGGAGAATTCAGATTGTGGAAACTGAACCACCAGTTAACCCGCGCAGGGTTAGGAAGCATGTCGAAGATAGAGATCAATCTAAGCAGCGACCGAGAAAACTCCGAATGACATCAAGGACTGTTGACAAACCACCAGCACAATCTGACAATGAAGTTTTACATGCTGAGCCAAGAAGTAAAGGGCTCAATATTATCCAGACAGGAGCAGAAGTAGTTCGAATCCAGATTCATGGAAATGAACAGTCCAATGAGACAGATTCTACTGCAAGGCCACTGGAAAAGGAGCTTGAGGTGCCTGCACAACTACCTGCACCCGAGTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCCACAGAAAGTATTTATACGAGTGGAAGGCCAATACACTATCCTGAGTTGCAAAACCCTGACATGCAGCATGAACCCACTTATAATCTTTATAATCCCGCAGCAGGGTATGATCCTGGTCATAGGCAGCAGCTACATCCTGGGAACAACAGTGAAGGAAGGCCAGAGATTGATGCAGTTCATGTACAGGCTGTGCATATAAAAGGGGATGAAATTACTGGAGGAGATCTGCAATATTTTGGTAAAGATGCATTTCAGAATGAGCTTGATAGACCTATTGATCATTCTTTCTTTGGATCACCGCTTAGTAGCATGTCATTAGATTTTGGAGGACTTAACAGTCCATTGCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1914 0.4269 MFQWSFRTLEFSFMCPVISGDQVSLHFLSSNLYPFNQSKRFFYIIKNLVINGHELNCSSDLEVDDIRCPNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGVTGMLPGVPAENKQAATSSASNYDVDGTDDGIGSVSSKEDRRIQIVETEPPVNPRRVRKHVEDRDQSKQRPRKLRMTSRTVDKPPAQSDNEVLHAEPRSKGLNIIQTGAEVVRIQIHGNEQSNETDSTARPLEKELEVPAQLPAPEFDHYSYLHTNNLISTESIYTSGRPIHYPELQNPDMQHEPTYNLYNPAAGYDPGHRQQLHPGNNSEGRPEIDAVHVQAVHIKGDEITGGDLQYFGKDAFQNELDRPIDHSFFGSPLSSMSLDFGGLNSPLHLDDFLGDDEMIQYFGA 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00328 637 Coils Coil 83 103 - -
Vian11g00328 637 Gene3D - 118 194 IPR023278 GO:0003700|GO:0005634
Vian11g00328 637 Gene3D - 203 342 IPR023278 GO:0003700|GO:0005634
Vian11g00328 637 MobiDBLite consensus disorder prediction 335 435 - -
Vian11g00328 637 SUPERFAMILY DNA-binding domain of EIN3-like 212 335 IPR023278 GO:0003700|GO:0005634
Vian11g00328 637 MobiDBLite consensus disorder prediction 108 130 - -
Vian11g00328 637 FunFam Ethylene insensitive 3-like 1 205 341 - -
Vian11g00328 637 MobiDBLite consensus disorder prediction 378 424 - -
Vian11g00328 637 Pfam Ethylene insensitive 3 84 331 IPR047091 GO:0003700
Vian11g00328 637 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 61 624 IPR006957 GO:0003700|GO:0005634
Vian11g00328 637 FunFam Ethylene insensitive 3-like 1 118 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00328 Vian-Chr11 3113675 3115588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00328 62 637 EIL Transcription Factor Family AT1G73730 53.220 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vian11g00328 EIN3 6.2e-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00328 K14514 - gmx:100812970 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00328 11 3113675 3115588 Vian11g00328 11 3113675 3115588 ECH