Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00302 ATGGATCACGAATCTGGCCAAGGATTTGACTCGGATGATAGTGACCTTGAAATGCAAGCAGAAATTAGTGAGAAACACCAGAAAATAGATGAATTTTCAAAAGACCTAGAATTATGTGGAAGTGAAGATGAGAAGTTTGTCGAACCACCTGCAACAGAGATTCCAACAGATATAGAAGCTGTTGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCGAGAGAATTCTACATTGCCTATGGTAGGCGAATAGGGTTTACGGTACGAATACACCACAACCGTCGTTCACGAGTAAATAACCAAGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGTGCAAAAAAGTATGTACACAGAAAAGATAGGGTGCTGCCTCCGCCACCAGCCACTCGTGAAGGTTGTCAAGCCATGATAAGGCTGGCTTTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTAAAGGAGCATAATCATAAGCTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGCGAGGATGAGAAGGATAGGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGGCAAAAGTGCAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATATAATTCTGAATGATTTAGAGAAGCACACCGAACATATTTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATTAGAGAGATTGAGGAGGAAAAATCAGATTCGGATGGTGGGTAA 765 0.4209 MDHESGQGFDSDDSDLEMQAEISEKHQKIDEFSKDLELCGSEDEKFVEPPATEIPTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKHLVSEDEKDRRIRELSLELYNERQKCKRRCAAYEEQLNIILNDLEKHTEHISEKVAAVVRSIREIEEEKSDSDGG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00302 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 247 - -
Vian11g00302 254 Coils Coil 202 229 - -
Vian11g00302 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Vian11g00302 254 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00302 Vian-Chr11 2819810 2821507 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian11g00302 FAR1 6.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00302 - - gmx:100813124 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00302 11 2819810 2821507 Vian11g00302 11 2819810 2821507 ECH