Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00298 ATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGTAGGAAATGTTACTCTAGGGCAGATTAACAGTTGCAGCACACCTGATGAAAACAAAGTAGGTTGCAGCTCTTTCAATCCTGCTTATAAACATGATCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCAGTTGTTTCAGCTGATGAGCCCTATGTGGGACAGGAGTTTGATTCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCTACCCGTGTTGGATTCATCATACGTGTGAGTAAGCTCTCACGATCAAGGCGTGACGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACTAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCCGGTAAATGGGTTGTTACTAAGTTTATACAGGAGCACACTCATCCTTTAACACCTGGAAAAGGTAGAAGGGATTGCATTTACGAGCAATACCCGAACGAACATGATAAAATTCGAGAACTGTCTCAGCAGTTGGCCATTGAGAAAAAACGGTCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCACATTGAAGAGCATAATGAAAGCCTTTCAAAGAAAATACAACACATAGTGGACAGTGTGAAGGAGATGGAAACCAAAGAACAACAGAGTCATAGATAG 765 0.4209 MEFGIDGSINGETVGNVTLGQINSCSTPDENKVGCSSFNPAYKHDHDDNITQDSSGGDTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVDSVKEMETKEQQSHR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00298 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 251 - -
Vian11g00298 254 Pfam FAR1 DNA-binding domain 90 176 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00298 Vian-Chr11 2798350 2800711 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vian11g00298 FAR1 6.5e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00298 - - gmx:100806900 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00298 11 2798350 2800711 Vian11g00298 11 2798350 2800711 ECH