Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00284 ATGCCGAAGCAGATTCATGAGATTAAAGACTTCCTCCTCACTGCGAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAAAGATGTGGTAAAGTTCAAGGTTCGCTGCTCCAAGTACCTGTACACCCTCTGTGTGTTTGACTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTAGGAGAAGTAGGTTTGAGTGTGCAAGATGTGTGATTCTGGCTGGTGTTGATGAAGATCAGGTTTTGTTTTGGATTTTGGGGATTCATAGTTAG 282 0.4504 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGRRSRFECARCVILAGVDEDQVLFWILGIHS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00284 93 PANTHER 60S RIBOSOMAL PROTEIN L38 1 64 IPR002675 GO:0003735|GO:0005840|GO:0006412
Vian11g00284 93 Gene3D - 1 67 IPR038464 -
Vian11g00284 93 FunFam 60S ribosomal protein L38 1 68 - -
Vian11g00284 93 Pfam Ribosomal L38e protein family 2 63 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00284 Vian-Chr11 2690286 2691472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00284 1 63 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 95.238 1.05e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00284 K02923 - mnt:112094600 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00284 11 2690286 2691472 Vian11g00284 11 2690286 2691472 ECH