Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00267 ATGGCGTACCAGACCCCTGATCGAGATTCTGAATCGGATCCGAAGACACCAACGCGTCTCTATAACCCCTACAAGGACCTTGAAGTCCCCATTCGCAACCTCTACCAGCTCCCGACTTCCCCCGAGTATCTCTTCGTCGAGGAGGCTCGCCGCAAGCGTCGATCCTGGGGCGAGAACCTCACCTTCTACACAGGATGTGGCTACCTTGCCGGCGCCGTCGGCGGTGCCACCGCCGGCCTCATCGAAGGCGTAAAGTCCTTCGAGTCCGGTGACACCGCCAAGCTTCGCATCAACCGCGTCCTCAACTCCTCCGGTCATGCCGGCCGAGCCTGGGGCAACCGCCTAGGCGTCATTGGCCTGCTATACGCCGGCATCGAGAGCGGGATCGAGGCGGCGAGGGACACCGACGACGTCTGGAACAGCGTTGCGGCCGGACTCGGCACTGGCGCGTTGTATCGTGCCGCGAGAGGGGTGCGGTCGGCGGCGGTGGCGGGGGCTGTTGGCGGCGTCGTGGTTGGAGTTGCTGTCACCGCGAAGCAGGCATTGAAACGCTACGTGCCTATTTGA 567 0.6349 MAYQTPDRDSESDPKTPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGATAGLIEGVKSFESGDTAKLRINRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00267 188 MobiDBLite consensus disorder prediction 1 21 - -
Vian11g00267 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Vian11g00267 188 PANTHER TIM23 32 177 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00267 Vian-Chr11 2553888 2554454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00267 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 70.492 9.99e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00267 K17794 - gmx:100813158 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00267 11 2553888 2554454 Vian9g00307 9 2865240 2865776 PCT