Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00256 ATGACGCGGGGGAGGATCAGGGCAAGGCTCCGTAGGAGGAGCCATCTTTACACATTTGGTTGCCTGAAGCCAACCACCACCGAGGAGTTGCCCTATTCACTTCAAGGTCCTGGCTACTCGCGAACAGTCTTCTGCAACCAGCCTCTACTCCATGAAAAGAATTCCCTATTTTACTGCAAGAATGATATATCAACCACCAAGTACAATGTCATAACGTTTCTGCCTAAGGCATTGTTTGAACAGTTTCGAAGGGTTGCTAACATATACTTTCTTTTGGCTGCTTGCCTTTCGGCTTCTCCAATTTCGCCTTTCAGCGCACTGAGCATGGTTGCACCTCTGGCGTTTGTTGTGGGACTTAGTATGGTGAAGGAGGCATTGGAGGACTCTCGCAGGTTCTTTCAGGATGTCAAAGTTAATCGACGGAAAGTTTGTCTCCATATAGGCAATGGCACTTTCGGCCTTAGATCGTGGCAGAAGATTGTGGTTGGGGATGTGGTCAAAGTAGAAAAAGATCAATTTTTTCCAGCCGACTTGCTTCTCTTGGCGTCAAGTTATGAGGATGGAATATGCTATGTGGAAACAATGAATTTAGATGGAGAGACCAACTTGAAGGTGAAGAGATCCTTGGAGGCTACCTTGTCTCTGGATAACGACGAGGCTTTTAAGGATTTCTCTGGAACAATATATTGTGAAGATCCAAATCCCAATCTTTACACTTTTATTGGGAACTTTGAACATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTTCTCAGAGATTCGAAGCTTAGGAACACTGATCATGTTTATGGAGTGGTCATTTTTACTGGACATGACAGCAAAGTCATGCAGAATTCTACTAAATCCCCTTCAAAGAGAAGCACAATAGAAAAAAAGATGGATTATATCATATATACACTTTTCACTGTCCTTATATTGATATCTTTTATTAGTTCAATAGGATTTGTTGCAAAGACCAAATACCAAGCCCCAACTTGGTGGTATTTACGGCCTGACAATATTGAATACCAGTTTGATCCTGAGAAAATTGGATTGGCTGGAATGAGCCATCTGATTACTGCGCTCATTCTCTATGGATATTTGATTCCTATCTCGCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCAACCTTCATTGACCAAGACATTCAAATGTATGATGATGAAACTGGAACTCCAGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGCACTTTAACTTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCGGGTACTGCATATGGTGTTCGTTCCAGTGAGGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAAGAGCCGGACATGGATATGTCTAATTTTTCCATTCCTGAGGAGAGTAAAGTGCCATGGGAAAATATCACTGTAGATGAAGAATCTGAACTGGGGAATTTTGCTAATTCCAAGAATGATGAAGATCAACGGACTTCCATAAAGGGATTTGGTTTTGAAGATGATCGCCTCATGAATGGTAACTGGATGAAAGAACCCAATGCCGATGTCCTTTTACTGTTTTTCCGGATATTAGCAATTTGCCATACTGCCATCCCTGAACTAAATGAGGAGACCGACTATTGTACATATGAGGCCGAGTCACCTGATGAAGGGGCTTTTCTAGTAGCAGCCAGAGAATTTGGTTTTGAATTTTATAGGAGAACTCAATCAAGTGTTGTCATCCGCGAAAGATTTCCTGCCTCAGGACAAGTGGTTCAAAGAGAATATAAAATTTTGAATCTGCTGGATTTTACTAGCAAAAGAAAGCGCATGTCAGTCATTGTGCGTGACGAGGAGGGAAACATCATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGACTGTCTAAGAATGGAAAAATGTATTTGGACGCTACTACTAGACATTTGAATGAATATGGAGAAGCTGGCTTGAGAACACTAGCCTTGGCCTATAGAGAGCTTGACGACCTAGAGTACTCTGTTTGGAATAACAAGTTTCAGAAGGCCAAAACAACTATTGGGCCTGACAGAGAGGCAATGCTTGATCAGGTTTCAGATGTTATGGAAAGAGAGTTGATACTTGTTGGCGCTACTGCTGTGGAGGATAAACTACAGAAAGGGGTGCCACAATGCATTGACAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTACTTCGACAGGGCATGAGGCAAATCTGTATCACAATGAATTCAGATTCAGCAACCAATGATGCGAAAGAGGTCATCAAAGGAAACATCTTGAATCAAATCACCAATGCCTCGCAAATGATAAAGCTAGAAAAGGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACGTATGCTTTAGAAGATGATGTCAAACTCCAATTTTTGGGACTGGCTGTTGGCTGTGCGTCTGTTATTTGTTGTCGTGTGTCTCCAAAGCAAAAAGCACTGGTTACAAGGCTAGTGAAAGAAGGAACTGGGAAGACCACTTTGGCCATTGGTGATGGTGCAAATGATGTTGGCATGATTCAGGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTAATGGCTAGTGACTTTTCTATTGCCCAATTCCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATTTTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGACAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATTTCTCTTGGAGTTTTTGAACAAGACGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTATAGAATCTTGGGATGGATGGGGAATGGTCTTTATTCCTCCCTCGTCATCTTCTTCCTTGTCATTATCATCTTCTATGACCAAGCATTCCGTGCCAATGGCCAGGTCGCAGACATGGCTGCTGTTGGTACCACGATGTTCACTTGCATCATCTGGACTGTCAATTGCCAGATTGCACTGACAATGAGCCATTTCACATGGATTCAACACCTCTTTGTGTGGGGAAGCATAACCACTTGGTACCTCTTTCTCTTGTTATATGGCATGCTTCCACCAAAACATAGCAAATCTGCCTACCAAATATTGGTGGAGGTTCTTGCTCCTGCTCCTATTTATTGGACAACAACCGTATTAGTAACAATTACATGCGTTCTTCCATATCTCGCCCACATATCCTTCCAAAGATGTTCTCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAGCACATGTGGACGAGGGAGCGGTCTAAAGCAAGGCAAGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCAAATATTAGGCATTTTAGAGGTAAGTTGCAGAAGAAGCAGCAGCAGTCTTCAGTGGGGTCTTCAGTGGGATCTTTGTCCCCATTATGA 3690 0.4217 MTRGRIRARLRRRSHLYTFGCLKPTTTEELPYSLQGPGYSRTVFCNQPLLHEKNSLFYCKNDISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSASPISPFSALSMVAPLAFVVGLSMVKEALEDSRRFFQDVKVNRRKVCLHIGNGTFGLRSWQKIVVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEATLSLDNDEAFKDFSGTIYCEDPNPNLYTFIGNFEHENQVYPLDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQAPTWWYLRPDNIEYQFDPEKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFIDQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEPDMDMSNFSIPEESKVPWENITVDEESELGNFANSKNDEDQRTSIKGFGFEDDRLMNGNWMKEPNADVLLLFFRILAICHTAIPELNEETDYCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVIRERFPASGQVVQREYKILNLLDFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSKNGKMYLDATTRHLNEYGEAGLRTLALAYRELDDLEYSVWNNKFQKAKTTIGPDREAMLDQVSDVMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMRQICITMNSDSATNDAKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVIIIFYDQAFRANGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSITTWYLFLLLYGMLPPKHSKSAYQILVEVLAPAPIYWTTTVLVTITCVLPYLAHISFQRCSHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEANIRHFRGKLQKKQQQSSVGSSVGSLSPL 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00256 1229 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Vian11g00256 1229 Gene3D - 725 920 IPR023214 -
Vian11g00256 1229 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1158 IPR032630 -
Vian11g00256 1229 SUPERFAMILY HAD-like 411 924 IPR036412 -
Vian11g00256 1229 Pfam Cation transport ATPase (P-type) 550 651 - -
Vian11g00256 1229 NCBIfam HAD-IC family P-type ATPase 847 961 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian11g00256 1229 Gene3D - 420 434 IPR023214 -
Vian11g00256 1229 FunFam Phospholipid-transporting ATPase 591 722 - -
Vian11g00256 1229 Pfam Phospholipid-translocating ATPase N-terminal 43 109 IPR032631 -
Vian11g00256 1229 SFLD C1.7: P-type atpase like 405 931 - -
Vian11g00256 1229 CDD P-type_ATPase_APLT_Dnf-like 61 1040 - -
Vian11g00256 1229 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1149 IPR023298 -
Vian11g00256 1229 SUPERFAMILY Calcium ATPase, transduction domain A 143 287 IPR008250 -
Vian11g00256 1229 FunFam Phospholipid-transporting ATPase 724 920 - -
Vian11g00256 1229 Gene3D - 591 724 IPR023299 GO:0000166
Vian11g00256 1229 Gene3D - 435 471 IPR023299 GO:0000166
Vian11g00256 1229 NCBIfam phospholipid-translocating P-type ATPase 58 1166 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian11g00256 1229 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Vian11g00256 1229 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Vian11g00256 1229 FunFam Phospholipid-transporting ATPase 119 289 - -
Vian11g00256 1229 Gene3D - 112 289 - -
Vian11g00256 1229 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1184 - -
Vian11g00256 1229 SFLD p-type atpase 405 931 IPR044492 -
Vian11g00256 1229 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00256 Vian-Chr11 2464857 2470716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00256 1 1228 Primary Pumps ATPases AT1G17500 74.390 0.0 1907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00256 K01530 - gmx:100778710 2194.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00256 11 2464857 2470716 Vian9g00286 9 2586435 2592406 PCT