Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00242 ATGGAAGGTGGCACGAGTTCCTCAAGGAGCACCATACAGGCTTGTGCTGCTTGTAAGTTCCAACGCAGGAAGTGCGGACCCAACTGCATTCTCGCACCTTTCTTTCCTCCTTATCGCCAAAAACAGTTCCTTAATGCTCACAAGCTTTTCGGAGTTGGCAAAATCACCAGCATGATCAAGCCTCTTGACCCTGTTAACAGAAACTCAGCCATCGACGCCATTATCTTTGAGTCAGATATGAGAGCCAAAGACCCTGTTGGGGGCTGCTTGAGAACCATTCTATACTTGCAATCTGTCATCGCTTCTGCAGAATCTGAACTCCAATTTCTCCTTCAACACCTTGCCTTCTTCAGAGCACAAGCTCTTGATTCCATCGCCACACCACAACCACCACCACCACCACCTTCCTCCTCCCACGACCCTTATCATCAAGGAATGTCACTTCAAGAATCAAAAGATCCGTCACAACTTCACCCACAAGAACTTGGAAATGATCCCTCACAACTTCAACAACAAGAACAACCAAAAGATTCGTTCTTTAATTACAGTTCATTGCAAGAAGATATGAACGTGTCGGACATTGACAGCTTAGTACCTTTCTCTCCGTGGCTATCGCCGCTGGATGACATCAGCCAATATCAAGATCCCTGA 651 0.4654 MEGGTSSSRSTIQACAACKFQRRKCGPNCILAPFFPPYRQKQFLNAHKLFGVGKITSMIKPLDPVNRNSAIDAIIFESDMRAKDPVGGCLRTILYLQSVIASAESELQFLLQHLAFFRAQALDSIATPQPPPPPPSSSHDPYHQGMSLQESKDPSQLHPQELGNDPSQLQQQEQPKDSFFNYSSLQEDMNVSDIDSLVPFSPWLSPLDDISQYQDP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00242 216 MobiDBLite consensus disorder prediction 125 184 - -
Vian11g00242 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 160 - -
Vian11g00242 216 MobiDBLite consensus disorder prediction 140 184 - -
Vian11g00242 216 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Vian11g00242 216 Pfam Lateral organ boundaries (LOB) domain 14 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00242 Vian-Chr11 2358814 2359464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00242 13 189 AS2 family AT3G13850 43.684 4.63e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vian11g00242 LOB 1.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00242 - - vun:114184788 331.257