Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g00242 | ATGGAAGGTGGCACGAGTTCCTCAAGGAGCACCATACAGGCTTGTGCTGCTTGTAAGTTCCAACGCAGGAAGTGCGGACCCAACTGCATTCTCGCACCTTTCTTTCCTCCTTATCGCCAAAAACAGTTCCTTAATGCTCACAAGCTTTTCGGAGTTGGCAAAATCACCAGCATGATCAAGCCTCTTGACCCTGTTAACAGAAACTCAGCCATCGACGCCATTATCTTTGAGTCAGATATGAGAGCCAAAGACCCTGTTGGGGGCTGCTTGAGAACCATTCTATACTTGCAATCTGTCATCGCTTCTGCAGAATCTGAACTCCAATTTCTCCTTCAACACCTTGCCTTCTTCAGAGCACAAGCTCTTGATTCCATCGCCACACCACAACCACCACCACCACCACCTTCCTCCTCCCACGACCCTTATCATCAAGGAATGTCACTTCAAGAATCAAAAGATCCGTCACAACTTCACCCACAAGAACTTGGAAATGATCCCTCACAACTTCAACAACAAGAACAACCAAAAGATTCGTTCTTTAATTACAGTTCATTGCAAGAAGATATGAACGTGTCGGACATTGACAGCTTAGTACCTTTCTCTCCGTGGCTATCGCCGCTGGATGACATCAGCCAATATCAAGATCCCTGA | 651 | 0.4654 | MEGGTSSSRSTIQACAACKFQRRKCGPNCILAPFFPPYRQKQFLNAHKLFGVGKITSMIKPLDPVNRNSAIDAIIFESDMRAKDPVGGCLRTILYLQSVIASAESELQFLLQHLAFFRAQALDSIATPQPPPPPPSSSHDPYHQGMSLQESKDPSQLHPQELGNDPSQLQQQEQPKDSFFNYSSLQEDMNVSDIDSLVPFSPWLSPLDDISQYQDP | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g00242 | 216 | MobiDBLite | consensus disorder prediction | 125 | 184 | - | - | |
Vian11g00242 | 216 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 160 | - | - | |
Vian11g00242 | 216 | MobiDBLite | consensus disorder prediction | 140 | 184 | - | - | |
Vian11g00242 | 216 | ProSiteProfiles | LOB domain profile. | 13 | 114 | IPR004883 | - | |
Vian11g00242 | 216 | Pfam | Lateral organ boundaries (LOB) domain | 14 | 109 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g00242 | Vian-Chr11 | 2358814 | 2359464 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g00242 | 13 | 189 | AS2 family | AT3G13850 | 43.684 | 4.63e-41 | 139 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Vian11g00242 | LOB | 1.6e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g00242 | - | - | vun:114184788 | 331.257 |