Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00241 ATGGCCGCAGGATCTCTCCAATCCATCATCTCTCACTCCCACCCCAACGGCTTAACCGAGCCCTGCATCGCGGTGGTTCTTAGAGACACCCTCAATGCCCTCTCCTACCTCCACGGCCAGGGCCACCTCCACCGTGACATAAAAGCCGGGAATATCCTCGTTGACACAAACGGACAGGTAAAGCTCGCGGATTTCGGCGTGTCGGCTTCCATCTACGAGTCCTCCACGTGTTCCTCTCTCAAGTTCACCGATGTTGCAGGCACGCCGTATTGGATGGCTCCGGAGGTGATTCACTCGCATACAGGGTACAGTTTCAAGGCTGATATATGGTCCTTTGGGATAACCGCTTTGGAGCTCGCGCATGGAAGGCCTCCTCTCTCCCATCTTCCACCTTCAAAGTCCATGATGCTCAAGATCACCAAGCGGTTTCGGTTCTCCGATTTGGATAAATATAGAAAGGGGAACGGGAATAAGTTCTCCAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTGGACCAAGATCCTTCCAAAAGACCCACTGCTGATAAGTTGCTGAAACACCCCTTCTTTAAAAACTGCAAAGGAACTGATTTTCTGGTCAAGAACGTGCTTTTAGGGTTACCCAGTGTGGAGAAAAGGTACAAGGAGAGCAAGGTTAACGAACATGCAGATGGGGGAGGCCACGATGATGATGATGATGATGAAGACCCCGCCATGCTGGTGAAGGAGAGAAGGATTAGTGGATGGAACTTCAACCAAGACGGGTTGGAGCTTGATCCTGTGTTTCCAAACGATGATGCGGGGGCTAAAAAGGCTGAGCTTGGAGGGGAAAGTGTTATGAGAAAAATGGAGGAGCTTGTCAATGATGGTGGAAATGAAGCAGGAAGTGGTGGTGGTGGTGTGAAGAAGAGGGAGAAGATGTTGACGACTTTGAATATGCTGAAAGGGAGCTTGGAACAAGAGCTGTTGGAAGTGAAGTTTCTTGTGAATACAATAAGAGGAGAGGAGGAGAGTGATCGTGATCAAGTGGCTGCTGCTGCTTCTGCTGATCATAGTGAGGAGAAGGAGATTTCTAGGCTCAGGGCTGCACTGGAAAATGAGAGGAAGAAGAACTTGCAGCTGGAGTTGCAGCTCCACAACTGCAAGATTCAACTTTCTTCTCTCAATATTTCCAACTAA 1179 0.4953 MAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESSTCSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKGNGNKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVKNVLLGLPSVEKRYKESKVNEHADGGGHDDDDDDEDPAMLVKERRISGWNFNQDGLELDPVFPNDDAGAKKAELGGESVMRKMEELVNDGGNEAGSGGGGVKKREKMLTTLNMLKGSLEQELLEVKFLVNTIRGEEESDRDQVAAAASADHSEEKEISRLRAALENERKKNLQLELQLHNCKIQLSSLNISN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00241 392 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00241 392 FunFam Serine/threonine-protein kinase BLUS1 4 236 - -
Vian11g00241 392 SUPERFAMILY Protein kinase-like (PK-like) 1 202 IPR011009 -
Vian11g00241 392 Gene3D Transferase(Phosphotransferase) domain 1 1 231 - -
Vian11g00241 392 Pfam Protein kinase domain 2 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00241 392 SMART serkin_6 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00241 392 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 370 IPR047173 GO:0043539
Vian11g00241 392 Coils Coil 357 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00241 Vian-Chr11 2356025 2357203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00241 1 373 MAP Kinase Kinase Kinase Kinase AT4G14480 51.870 1.14e-126 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vian11g00241 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00241 K08835 - gmx:100820227 565.459