Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00213 ATGTTTGCAATAAATCTAATATCAGGATTGGAGTATCTTCAAACTGGTTGCAAGCCTCCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGGATGAAAAGTTCCAAGCAAAATTATCAGATTTCGGTCTATCCAAAATTATCCCTATAGATGGGGGAACTCATGTGTCAACTGTTGTTGCTGGTACTCCCGGTTATCTAGACCCAGAGTACTACATATCCAATAGATTAACACAAAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATCATCACTTATCAACCAGTAATAGTAATAGCAAGGAATGAAGAAAGGGTTCACATCATTGAATGGGTCAGATCACTGATTGAAAAAGGGGATATCAAGGCGATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAATTCAGCTTGGAAAGCCGTAGAAATAGCAATGGCATGTGTTTCCTTTAATCCCAGTGAAAGACCAATGCTGAGGATGATAGTGACTGAACTAAGAGATACTTTAGCAATCGAATTAGCTCGAACACAACTCATTGATGCACATCTAACAACAGATTCTATTGAACCGCTCGCCATGAATCTAGACACTGAATTCACTCCTCTGGCGAGGTAA 633 0.3807 MFAINLISGLEYLQTGCKPPIIHRDIKSTNILLDEKFQAKLSDFGLSKIIPIDGGTHVSTVVAGTPGYLDPEYYISNRLTQKSDVYSFGVVLLEIITYQPVIVIARNEERVHIIEWVRSLIEKGDIKAIVDSRLEGDFDINSAWKAVEIAMACVSFNPSERPMLRMIVTELRDTLAIELARTQLIDAHLTTDSIEPLAMNLDTEFTPLAR 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00213 210 FunFam Lectin-domain containing receptor kinase A4.3 2 189 - -
Vian11g00213 210 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Vian11g00213 210 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00213 210 SUPERFAMILY Protein kinase-like (PK-like) 2 169 IPR011009 -
Vian11g00213 210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Vian11g00213 210 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00213 210 PANTHER OS07G0107800 PROTEIN-RELATED 3 175 - -
Vian11g00213 210 Pfam Protein kinase domain 3 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00213 Vian-Chr11 1985779 1986521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00213 3 210 Receptor kinase-like Gene Family AT1G51890 55.288 1.09e-77 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vian11g00213 Pkinase 1.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00213 - - gmx:100795183 343.199