Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00202 ATGGGCAAAGCTACTAGATGGTTGAAGGGGTTGCTGGGAATGAAGAAAGAGAGAGACTGCTGTGGCTATTCGGGCTCGCTGGGAACTGACAAGAGAGAAAAGAAACAATCGGAGAAGAATGAAGAGAGTCACATTACACCATCTACCATTGATCATACTAAGCGCAGATTCTATGTTGCCAAAAAAGAGGGTGTGAAGAACAAACAGGTCACTGGTGTGGCAGTTGAGAGATCAAGAAGGAGTGGCAGAAACACCTTGATGATTGGAAGCAAGGAGGGCTGGGCTGCTGTGTCAATTCAATCCATTTTCAGAGGTTATTTGGCTCTTGTTAGAGGGTATCTAGTTCGGAAAAGGGTTGCTGCAACTCTTCACAGTGTGCAAGCAATGATGAGAGCTCAAGCTGTTGCTCGATCGGTTCGAGCTCGTCGATCCATGGACAAGGAGAACAGATTTCACCCAGAATCTCCTTCCAGAAAATATGTGCAACAGTTTGATGCAACAAGAAATTATCAATCTCGCAACAGAAGGGCACGCATATACTGTAAGGCACCATCGAATGGATTTGACGAGAGCTCAAAAGTTTTTGAGTTTGACAATCGCATGGCCCATTCAAGATCTCGGAGCATTAACACTGCAATGTCTGAATGTGGAGAAGAGCTGCATTATCAAGCAATGTCCTCCTCTCTCCCATGTCAAGTTCAAGGTCGAATCTCGCTTCATGAAAGGCGTCAGCACCCTCAAGAGTTTGAATGGTTCTTCAATCTTGACGAAGGTAACAAGTTCTCCTCAGCACACAACACCCCTCGTCTATCAAAATGTACGACACCAGCTACTCCATTGAAGAGTGTTTGTGGTGACACCTTCAGGAGCTGCTCCGATTTCCCTAACTACATGGCCAACACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACACAGAAAAAGGCTTTCGATCAATGAAATCATGGCAGCCAGAAACAGTGTCAGTGGTGTTGGAAAGCAGTGGTTATCCAACCCAAAAACTCAAGATTGCTATTTCTTTGACAAGGTTATTTAG 1080 0.4509 MGKATRWLKGLLGMKKERDCCGYSGSLGTDKREKKQSEKNEESHITPSTIDHTKRRFYVAKKEGVKNKQVTGVAVERSRRSGRNTLMIGSKEGWAAVSIQSIFRGYLALVRGYLVRKRVAATLHSVQAMMRAQAVARSVRARRSMDKENRFHPESPSRKYVQQFDATRNYQSRNRRARIYCKAPSNGFDESSKVFEFDNRMAHSRSRSINTAMSECGEELHYQAMSSSLPCQVQGRISLHERRQHPQEFEWFFNLDEGNKFSSAHNTPRLSKCTTPATPLKSVCGDTFRSCSDFPNYMANTHSSKAKLRSHSAPKQRPEHRKRLSINEIMAARNSVSGVGKQWLSNPKTQDCYFFDKVI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00202 359 Pfam Protein of unknown function (DUF4005) 262 337 IPR025064 -
Vian11g00202 359 ProSiteProfiles IQ motif profile. 95 121 IPR000048 GO:0005515
Vian11g00202 359 MobiDBLite consensus disorder prediction 302 321 - -
Vian11g00202 359 MobiDBLite consensus disorder prediction 22 48 - -
Vian11g00202 359 PANTHER IQ-DOMAIN 5-RELATED 1 326 - -
Vian11g00202 359 Pfam IQ calmodulin-binding motif 94 108 IPR000048 GO:0005515
Vian11g00202 359 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00202 Vian-Chr11 1855667 1857122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00202 1 339 IQD Protein Family AT3G16490 38.776 1.05e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00202 - - gmx:100797296 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00202 11 1855667 1857122 Vian11g00202 11 1855667 1857122 ECH
Vian11g00202 11 1855667 1857122 Vian9g00205 9 1681880 1683524 PCT