Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00187 ATGGCATCCCTTTCGATCGTCCTATGTTCTTGTCTCATCATTTTCATGGCTGCCACGAACACTTCTGTTCAAGCTTCCATTCATTTCCAAGTTGGTGGCAGCCTTGGTTGGCACGAACCTGACCCCAACAATACTGAATTTTATAGCCAATGGGCTCAAAGGAACAGGTTTCAAGTCGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCAGTTCTCAGGGTGGAGAAATTGGATTACATGAATTGTGATGCAAGTAACCCCATCATAGCTTTTGACAATGGTAAGAGCACTTTTATTCTTGACAGGCCTGGGGACTTCTACTTCATCAGTGGAACCGGTGAACACTGCAAGAATGGGCAAAGATTAGTGGTGGATGTGATTCATGAACATCATTTTACATCTCCGCCACCCATTTCTCTTCCACCACAAGGCTTTCCACCAATGGCTTCTCCACCTGATCAAAGCTTTGAGGATTCAACATCTGCCTCAGTGATGATTACTGCAACTTCTGTGTCTGTTTTGGTGATCACGTTTGTTATTGTGGTGCTGTTAGCACCTTGA 564 0.4433 MASLSIVLCSCLIIFMAATNTSVQASIHFQVGGSLGWHEPDPNNTEFYSQWAQRNRFQVGDALVFEYQNDSVLRVEKLDYMNCDASNPIIAFDNGKSTFILDRPGDFYFISGTGEHCKNGQRLVVDVIHEHHFTSPPPISLPPQGFPPMASPPDQSFEDSTSASVMITATSVSVLVITFVIVVLLAP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00187 187 Gene3D - 27 136 IPR008972 -
Vian11g00187 187 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Vian11g00187 187 PANTHER BLUE COPPER PROTEIN 27 159 IPR039391 GO:0009055
Vian11g00187 187 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Vian11g00187 187 CDD OsENODL1_like 29 128 IPR041846 -
Vian11g00187 187 FunFam Early nodulin-like protein 1 26 132 - -
Vian11g00187 187 Pfam Plastocyanin-like domain 44 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00187 Vian-Chr11 1655194 1655886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00187 2 152 Phytocyanin Superfamily AT1G79800 43.791 1.19e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00187 - - gmx:100783893 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00187 11 1655194 1655886 Vian11g00187 11 1655194 1655886 ECH