Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00176 ATGATGACAGGGTTTCCTAACTGGTGGAGCATGCATCCACCATCTTTGATCCCTCCCCAATATCTTCTTCCACCTTCCTCAATTTCTTTTAATTTTTTCACCGAAAATCCAGACCCTCCTCAGTCATGGACCCAACTGCTTTCTACTGGATTACCCGGAGAAGAAGAGAAACTTGGTTTCATTGATTTTCAGCAGAAAAAGTTGGAAAACTGGGATGTCCAAATTCTTAATACTGCTTCCGGAGTTTCCAATAACTTTGATGAAATAAAGCAAGAAACTTCTCAAAGGGGCACTTTGTACGAACATGAGCATGAAGAATTTCAGGCTTCTGGCCCCGCTGACTCATCTTGGTCACACATGGTGCCTGTTTCTTCATCCGGGTCTTCTTGTGTCACTAGCATCAGTGGCAATAATATATTTGATTTCAGTTATAACAAGTCAGATCACAGCAAAAATCTTCTACGAGACCAAATATCCGAGTGTAATAGCACAGCCACAGTTGGTGTTTGTAAGAAAGCTAGGGTTCAGTCATCTTCAAGTCAAGCACCTATCAAGGTTCGGAAGGAGAAGCTAAGTGATAGAATAACAACACTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATAAGGTTCCTGCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGAAGATGCATCAAAAAACACGAGGAATCAACAGTCTCTGCTGAAAGAGAATAATGGCCTGAAAAGAAAAGGAGCTAAAAACCAGGAAGCTGAAGATAAAGCAAAGGAGTTGAAGAGTAGAGGGTTATGCTTGGTGCCTGTGTCTTGTACCCAAGATGTTGTGAGCCAAAATGACTGGGGCACTCGCATATACGGCAGAGGATTTTAA 915 0.423 MMTGFPNWWSMHPPSLIPPQYLLPPSSISFNFFTENPDPPQSWTQLLSTGLPGEEEKLGFIDFQQKKLENWDVQILNTASGVSNNFDEIKQETSQRGTLYEHEHEEFQASGPADSSWSHMVPVSSSGSSCVTSISGNNIFDFSYNKSDHSKNLLRDQISECNSTATVGVCKKARVQSSSSQAPIKVRKEKLSDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLEDASKNTRNQQSLLKENNGLKRKGAKNQEAEDKAKELKSRGLCLVPVSCTQDVVSQNDWGTRIYGRGF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00176 304 Coils Coil 256 276 - -
Vian11g00176 304 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 175 224 IPR011598 GO:0046983
Vian11g00176 304 CDD bHLH_AtbHLH_like 183 232 IPR045239 -
Vian11g00176 304 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 83 288 - -
Vian11g00176 304 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 236 IPR036638 GO:0046983
Vian11g00176 304 Gene3D - 182 276 IPR036638 GO:0046983
Vian11g00176 304 MobiDBLite consensus disorder prediction 247 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00176 Vian-Chr11 1529066 1531279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00176 171 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 59.483 4.23e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00176 - - vun:114183597 461.07