Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00153 ATGCCCAAGAAAATTCGAGATTACCTCTTCAAAATCAAAAGCCCTCGTCCTCAAATCCGATTACCCTCTAAGAACTGGATTCTGTCTGGTTGCAAACATCCTAGGACACCTTCCTTTGCCTTGTACAGTGCTACAAACGAACCTTCTCGTCGTCGTCGTCATCATCAAGAACACGTTGTTCGTAATAACAACAACAATAACCACCGCAAGGACGATGCAGCCACCTTAGCAGATGTTGATCGTTTTCTCCTAGAGAATTTCAAGTCTTTGTACCTCAAAGACGACGATGAAACCTTAAACACCAAAAGGGTCTTCGAAGGTGACGACCAAAACCACGAAGCGGTAGAAACAACATCGCCGCGTGATGTTCGTGGGTCCACCCTGTTCTTTGTGAAGCCTGGGTTCTCTGGGTCACTGGTGGAGGACGCTCTCACAAACACCACCATTAATACAGCAACCAGTGACGAAGTAGGATCGGTGTCAACTGTCTCAACCCTCTACGACGTTTCGTCTTCCGGTTCTTACGAGAAGGAGAGTGCGGATAACGCGCTTCCGGATGATAGCATCGCTCTCTTGACGCACTCCACCAGCCCTTACGACGATTTCAGACGTTCCATGCAAGAAATGGTGAACAACCATGAAGGGGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTTCTTACCTTAATCTCAACCACAAAAAATCGCATAAGTTCATCCTCGGTGCTTTCGTCGATCTCATCACCGCCATCCGTCGGAGTAATTCTGAACCACCTTCCGACAAGCCACGTAGCGTTCGAACTGTTAGGAGTGTGACCAAAAACGTAACGTTAGGATTTGGGTCCTCTCTGTAA 858 0.4755 MPKKIRDYLFKIKSPRPQIRLPSKNWILSGCKHPRTPSFALYSATNEPSRRRRHHQEHVVRNNNNNNHRKDDAATLADVDRFLLENFKSLYLKDDDETLNTKRVFEGDDQNHEAVETTSPRDVRGSTLFFVKPGFSGSLVEDALTNTTINTATSDEVGSVSTVSTLYDVSSSGSYEKESADNALPDDSIALLTHSTSPYDDFRRSMQEMVNNHEGVVDWDFMEELLFSYLNLNHKKSHKFILGAFVDLITAIRRSNSEPPSDKPRSVRTVRSVTKNVTLGFGSSL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00153 285 ProSiteProfiles OVATE domain profile. 191 251 IPR006458 -
Vian11g00153 285 NCBIfam uncharacterized plant-specific domain TIGR01568 189 252 IPR006458 -
Vian11g00153 285 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 72 252 IPR038933 GO:0045892
Vian11g00153 285 Pfam Transcriptional repressor, ovate 195 251 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00153 Vian-Chr11 1357105 1357962 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vian11g00153 Ovate 1.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00153 - - vum:124828607 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00153 11 1357105 1357962 Vian11g00153 11 1357105 1357962 ECH
Vian11g00153 11 1357105 1357962 Vian9g00148 9 1202070 1202943 PCT