Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00102 ATGTCGGAGAGAAATGCTGATAAAGGAAAGAGGATTATCATTGGTGTTTCAACCTTGTTCTTGGTGGCTGTAGTTGGGGCTATCGTATTTGGTATCAACCTCAATGAGAGTGGTTCAAATGGAAATGGTGATAATGTTAATAACAAAAAGGAACATGTTACTGCCTCTGTAAAAGCCGTCCAAACCCTTTGTAATCCCACAAATTACAAGGAAGAATGTGAGGAAAATCTCATGGCAGGTGTCGGAGACAACACAACAACAGATCCATATGAACTTATCAAACTTGCTTTCAATATCACCATTGAAAAAATTACTGATAAATTCGAAGAAATGAATATCTTGCATGACATTGAGAAGGAGCCTAGAGCGAAGATGGCACTCGAAACATGCAGACAACTCATGGATCTTTCAGTTTCGGAGTTAGAAAGGTCATTTATTGGAATGAGCGAGTTTAACCTAATGAGTGTTGATAAAATCCTCATGAACTTAAAAGTTTGGCTAACTGGTGCACTTACATACCAAGACACTTGCTTGGATGAGTTTGAGAACACCACCAGCGATGCTGACAAATCCAAACGTGTGAATTGGAATGGGATTTTGAACCTCAATTCAAAAGCTGCACGTTTGTTCTCACCTTCCAAATTCTTTCATGGACTTGATTGGGTTCGGGCTACTGGGGTTCCTTGCTTCCATGGCGTGCCCCCACACTACAAGCACAAGAACACCACATTAACCTGGTGA 741 0.4076 MSERNADKGKRIIIGVSTLFLVAVVGAIVFGINLNESGSNGNGDNVNNKKEHVTASVKAVQTLCNPTNYKEECEENLMAGVGDNTTTDPYELIKLAFNITIEKITDKFEEMNILHDIEKEPRAKMALETCRQLMDLSVSELERSFIGMSEFNLMSVDKILMNLKVWLTGALTYQDTCLDEFENTTSDADKSKRVNWNGILNLNSKAARLFSPSKFFHGLDWVRATGVPCFHGVPPHYKHKNTTLTW 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00102 246 CDD PMEI-like_3 62 190 - -
Vian11g00102 246 FunFam Pectinesterase 56 207 - -
Vian11g00102 246 SMART PMEI_2 55 216 IPR006501 GO:0004857
Vian11g00102 246 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 187 IPR035513 -
Vian11g00102 246 PANTHER PECTINESTERASE 16 182 - -
Vian11g00102 246 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 211 IPR035513 -
Vian11g00102 246 Pfam Plant invertase/pectin methylesterase inhibitor 59 190 IPR006501 GO:0004857
Vian11g00102 246 NCBIfam pectinesterase inhibitor domain 55 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00102 Vian-Chr11 833238 835100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00102 1 193 Carbohydrate Esterase AT3G05610 37.056 5.38e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00102 K01051 - gmx:100803527 246.514