Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00093 ATGGGCGTCTTGAAACGCTTGTTTCGAGCGAAGTTTTGGAGGACGGTGGTGAAGGAGGGGTTGTTTTTGGTGAAGATTATCTTGGATAGTTCCTCTGAAGCTGTTTTTGTGTTCTGTTTAAGGCATTCGAAGAAAGTGTCGTGCAGTGCAGGATCTGTTGCTGCTACCACCGACAGAGTGAGGACACTGCTACATAACATCGAGGAGACCATTAAGATTGGGAAGGGAATTACTAAACTATATGCAACCATTGATCTGGAAAAAGCACGCGTGGGAAGAACTAGAATTATAGAAAAAGAACACACAAATCTTAAATGGTGCGAGTCTTTTCACATTTACTGTGCTCATATGGCATCAAATATCATATTCACAGTGAAAGATGACAACCCAATTGGTGCTACCTTAATCGGAAGAGCATATGTGCCCGTTGAGGGGATTTTGGATGGGAAAGAAATAGATAGATGGGTTGAAATATTGGATGAACACAAAAAACCAATACATTCACATTCCAAGATCCATGTGAAGCTGCAGTACTTTGATGTTTCAAAAGACCTCAACTGGGGCCAAGGTATCAGAAGTCCTAAATTCCCTGGAGTTCCTTACACTTACTTCCCACAAAGACAAGGATGTCGGGTTTCCTTGTATCAAGATGCTCATGTTCCAGACAATTTTGTTTCCAGAATACCACTTGCTGGAGCATTTGATATACATTACGTATGGTCTGTTTACACTGAGATAACGTTGGTAAGAGATTCTAGGAGACCAAAACCTGGAGGAGATGCAACACTCGGTGAGCTTCTAAAGAAAAAAGCACGTGATGGTGTCAGGGTTTTGATGCTTGTTTGGGATGATAGAACTTCTGTTCCTTTGTTGAAAGAAGATGGGTTGATGGCTACTCACGATGAAGATACCGGTAACTACTTCTACGACAGCGATGTGCACTGTGTTCTATGCCCTCGCAACCCTGATGATGGTGGAAGCGTTGTTCAGGACATAGAAATTTTCTCCATGTTTACGCATCATCAGAAAATTGTGGTTGTGGACAGTGCTTTACCCAGTGGAAGAGCATATAAACGAAGAATTGTGACACATCATGATGATTTCCATCAACCTAATTTTCCACACACTACGATAAAGAAAGGTGGTCCAAGGGATCCCTGGCATGACATTCACTCTCGGCTTGAAGGCCAAATTGCATGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAGGAAGCAAGGTGGAAAAGACCTGCTAGTTCCTCTGAGAGACCTTGAAGATGTGATTATTCCTCCATCCCCAGTAACTTACCCTGGTGATCATGAGACATGGAACGTGCAGTTATTTAGATCCATCGATGGTGGAGCAGCTTCTGGGTTCCCTGAGACTCCTGAAGAAGCTGCTAGATCAGGACTCATCAGTGGGAAGGATAATATAATTGACAGAGGCATTCAAGATGCTTACATCAACGCCATTCGACGTGCGAAGAACTTCATCTACATTGAGAATCAGTACTTCCTCGGAAGCTGTTATGCTTGGAGTGCTGATGGCATTAAGCCCGAAGACATTGGTGCATTGCACCTGATACCGAGGGAGCTTTCTCTTAAGATTGTTAGTAAGATTGAAGCTGGGGAAAGGTTCAGTGTTTATATTGTGATTCCAATGTGGCCGGAGGGTTACCCGGAGAAAGGAACAGTTCAGGCAATATTGGACTGGCAGCGGAGAACAATGGTTATATGA 1740 0.4333 MGVLKRLFRAKFWRTVVKEGLFLVKIILDSSSEAVFVFCLRHSKKVSCSAGSVAATTDRVRTLLHNIEETIKIGKGITKLYATIDLEKARVGRTRIIEKEHTNLKWCESFHIYCAHMASNIIFTVKDDNPIGATLIGRAYVPVEGILDGKEIDRWVEILDEHKKPIHSHSKIHVKLQYFDVSKDLNWGQGIRSPKFPGVPYTYFPQRQGCRVSLYQDAHVPDNFVSRIPLAGAFDIHYVWSVYTEITLVRDSRRPKPGGDATLGELLKKKARDGVRVLMLVWDDRTSVPLLKEDGLMATHDEDTGNYFYDSDVHCVLCPRNPDDGGSVVQDIEIFSMFTHHQKIVVVDSALPSGRAYKRRIVTHHDDFHQPNFPHTTIKKGGPRDPWHDIHSRLEGQIAWDVLFNFEQRWRKQGGKDLLVPLRDLEDVIIPPSPVTYPGDHETWNVQLFRSIDGGAASGFPETPEEAARSGLISGKDNIIDRGIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPRELSLKIVSKIEAGERFSVYIVIPMWPEGYPEKGTVQAILDWQRRTMVI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00093 579 Gene3D Endonuclease Chain A 465 578 - -
Vian11g00093 579 Gene3D Endonuclease Chain A 253 423 - -
Vian11g00093 579 SUPERFAMILY Phospholipase D/nuclease 183 429 - -
Vian11g00093 579 ProSiteProfiles C2 domain profile. 40 156 IPR000008 -
Vian11g00093 579 CDD C2_plant_PLD 74 179 - -
Vian11g00093 579 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 181 IPR035892 -
Vian11g00093 579 Gene3D C2 domain 60 187 IPR035892 -
Vian11g00093 579 SMART C2_3c 66 155 IPR000008 -
Vian11g00093 579 PANTHER PHOSPHOLIPASE D 77 577 IPR015679 -
Vian11g00093 579 Pfam C2 domain 75 158 IPR000008 -
Vian11g00093 579 SUPERFAMILY Phospholipase D/nuclease 432 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00093 Vian-Chr11 790497 797034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00093 63 577 Phospholipase D Gene Family (Wang group) AT3G15730 69.449 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00093 K01115 - gmx:100784434 877.085