Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00067 ATGTCTGACAGCAACCAATGTTCTTCTTCATCCATTAGCTCCAGTTTAGAATTGCAGAACAAGTCCTTAAAATCTGTAGACGGTACTGATTTTGACGAATATGATTTTGAACTGGAACCTGAAATCGAAGACGAGGATGAAGATTTCGAAACGAGCATCGATAATTACTCCTTTATTATTGAAGGGACCAACAAAGGCTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACCACGGTTATTGGGGCAGGGATCATGGCCCTCCCTGCCACTATGAAAGTTCTAGGATTGATTTTGGGGATTATTTTGATAATTCTTATGGGAATTTTGTCTGAAATTAGCTTGGAACTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCATCGTCCTATGGGGAGGTTGTTCAGCATGCAATGGGAAAGCCTGTGAGGATTTTGTCTGAAATCTGCATTATTTTGAACAATGCCGGTGTTTTGGTGGTATACTTGATAATCATGGGGGATGTTATGTCTGGTTCCTCTCACCATATGGGGGTTTTTGATCAGTTAATGGGGAATGGGGCGTGGGATCAAAGGAAGATTGTGGTTTTAGTTGTCATGGTGGTTTTCCTTGCTCCCCTTTGTTCACTTGACAAGATTGATTCATTGAGCTTGACCTCGGCTGCCTCCGTGGCTCTTGCTGTTTTGTTTGTCGTTGTTGCTTTTACGGTTGCTTTCATCAAGCTCGTGGAAGGACGGATTGATTCTCCCAGATTGGCTCCTGATCTTAGCTCCAAAACTGCAATTTTGGATTTTCTTGTTGCGATACCCATCATGACCAATGCATATGTTTGCCAGTTTAATGTGCCGCCTATATATAATGAGCTTAAACAACGGTCTCCTCAGAAGATGAACACGGTTGGGAGGTACACAACAGTTTTGTGCATCCTAGTTTATGCTTCCACTTCCATATCGGGTTACCTTCTCTTTGGGAAAGACACAGAGGCTGATGTACTGACTAATTTTGATAAGGATCTTGGAATTCGGTATAGCTCGGTCTTGAACTATATTGTCCGGATTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTTATTCATTTTTCACTGCGCCAAACAGTGGACGCATCATTGTTTGGGGGATCACCTCCTCTTTCAGAAAGTAAGAAGAGATCTTTGGGGTTGACTGCGGCTCTGTTGGTCCTCATATATATTGGGTCTACTATGATTCCAAACATCTGGACAGCTTTTAAGTTCACTGGGGCAACCACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTTCTTTGAGACTAAAACATCTGGGAGATCTAAGCTACGGAGAATGGGTTTTGTCATGGTTGATGTTGGTATTAGCTGTGACTGTTAGCATAGTAGGAGTTGTTAGCAATGTTTATAGCCTTCAGAGTAAGTCTTAA 1440 0.4194 MSDSNQCSSSSISSSLELQNKSLKSVDGTDFDEYDFELEPEIEDEDEDFETSIDNYSFIIEGTNKGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLILGIILIILMGILSEISLELLVRFSVLCKASSYGEVVQHAMGKPVRILSEICIILNNAGVLVVYLIIMGDVMSGSSHHMGVFDQLMGNGAWDQRKIVVLVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVVVAFTVAFIKLVEGRIDSPRLAPDLSSKTAILDFLVAIPIMTNAYVCQFNVPPIYNELKQRSPQKMNTVGRYTTVLCILVYASTSISGYLLFGKDTEADVLTNFDKDLGIRYSSVLNYIVRIGYILHLILVFPVIHFSLRQTVDASLFGGSPPLSESKKRSLGLTAALLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVSLRLKHLGDLSYGEWVLSWLMLVLAVTVSIVGVVSNVYSLQSKS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00067 479 Pfam Transmembrane amino acid transporter protein 67 468 IPR013057 -
Vian11g00067 479 PANTHER AMINO ACID TRANSPORTER 63 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00067 Vian-Chr11 624096 625535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00067 19 479 Amino Acid or Auxin Permease AAAP Family AT1G80510 70.194 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00067 - - var:108333183 797.734