Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00045 ATGGATTATTCATCACGGATTAACACTTCATTGGATCTCAATATCAATCCTCACAGGCTGCACGAAGAACTTCCCAAAAAGGAGGTGGAACACAATTTTTTCTCTTTGGGGGTGAAGAAATCCTCTGTAAAAGAACAGCAGTCTTCCAGTGCCTTGGTGGAGGAGCTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTGACCGAAATGCTGACGGAGATGTGTGAGAACTATAACTCTATGCGAAGCAATTTGATGGAATATATGAGGAAGAATCCTGACAAGGAGCAAAGCTCCTCGAAGAAAAGGAAGTCAGAAAGCAGCTTCAATAATAGTGCTCCGAAGAGCATGAACGGAAACTCCGAGAGCAGCTCAACCGACGAAGAATCATGCAAGAAACCAAAGGAAGACATCAAGACACCATTTTCAAAAGTTTACGTGAGGACAGAAGCATCTGATACAGGCCTGATTGTGAAAGATGGATATCAATGGAGGAAATACGGACAAAAGGTTACCAGGGATAACCCTTCTCCAAGAGCTTACTTCAAGTGCTCTTTCGCTCCAAGCTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACATATGAAGGAGAGCACAATCATCCTCACCCTTCTCAAATGGAGCCAACCGCAGGCTCCAACCGTGGTGTGACCCCATGTTCAGGGTCTCTCAGCTCTTCCGCACCAACAGTAACCCTTGACTGGACGAAATCCAAGTCCAGCACCGATTCCAAGAACATAACTCCCAAAATGGAGGCACCACAAATCCCTCAGGTTTTGGTAGAACAGATGGCCACTTCCCTCACCAAGGATCCTAATTTCAGAGCAGCACTGGTTGCCGCAATCTCAGGAAAAATGTTGCACAATAATTGA 915 0.4568 MDYSSRINTSLDLNINPHRLHEELPKKEVEHNFFSLGVKKSSVKEQQSSSALVEELKRVSAENKKLTEMLTEMCENYNSMRSNLMEYMRKNPDKEQSSSKKRKSESSFNNSAPKSMNGNSESSSTDEESCKKPKEDIKTPFSKVYVRTEASDTGLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPHPSQMEPTAGSNRGVTPCSGSLSSSAPTVTLDWTKSKSSTDSKNITPKMEAPQIPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00045 304 MobiDBLite consensus disorder prediction 212 243 - -
Vian11g00045 304 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian11g00045 304 MobiDBLite consensus disorder prediction 103 124 - -
Vian11g00045 304 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vian11g00045 304 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 300 IPR044810 GO:0003700
Vian11g00045 304 ProSiteProfiles WRKY domain profile. 156 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian11g00045 304 MobiDBLite consensus disorder prediction 220 243 - -
Vian11g00045 304 Coils Coil 49 76 - -
Vian11g00045 304 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vian11g00045 304 FunFam WRKY transcription factor 40 142 219 - -
Vian11g00045 304 MobiDBLite consensus disorder prediction 91 135 - -
Vian11g00045 304 Gene3D WRKY domain 141 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00045 Vian-Chr11 404132 405536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00045 4 304 WRKY Transcription Factor Family AT1G80840 53.628 1.50e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vian11g00045 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00045 - - gsj:114388658 486.493