Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00042 ATGGCAGATCTCAAGGAGAGGCTGCTACCACCAAAACCTGCTTCGGCTCTTAATGTAAGAGAGGTTGCCGCCAATCGACCATCTGCCTCTGGAAGGCAAGCTTTCCAAGGGGTGGATGTTCTGGGGTTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAAGCCATTGAAGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCTCGTGATCTTCGCCTACTTGATCCCTTGTTTGTCTACCCATCAACAATCCTTGGCAGGGAAAAAGCTATTGTTGTAAATCTGGAGCAGATACGGTGTATCATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTAATGGAGCTACAACGACGGTTGACAGCAACTGGGGTAGGGGAGGTTTGGCCATCAGAGGGTTCTGACATGAACCGAAGGAGGGGAAGTAGGAATTTTGATAATGTATTTAGCAACTCTTCCCCCGATTATTTACCTTTCGAGTTCAGGGCCCTTGAAGTAGCCCTGGAGGCGGCATGCACATTTCTTGATTCTCAGGTTCATTGTGGTGGAAAGTGGGAAACAGTAGTTGACAGTAGATACGGCATATTATTGTATGCCAAGGAGGTCAACCATAGATCATATGCAGCAGAGTTAGAAATTGAAGCTTATCCCTTGTTGGATGAACTGACATCAAAGATCAGTACTTTAAATTTGGAACGTGTTCGTCGATTGAAAAGCAGACTTGTTGCGTTGACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGACATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGATGGAGTTGTCATTTTACGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCCCCGGTTTCTCCTGTGTCATCACCTCCTGATTCTCGAAAGCTAGAAAAGAGCTTCAGTATTGCTAGAAGTCGACATGAGAGCATGCGAAGTTCTGAAAGTACTACGGAAAGTATAGAGGAACTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATAAACATCCAACTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTTGCCATCTTTGGAGTGGTAGCGGGAATATTTGGGATGAATTTTGAAATTGCATTATTCAATGTCCCCTCTGCTTTCCAGTGGGTCCTTATAATAACAGGAATTTGTGGAGTATTTATATTTTCTGCATTCGTGTGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAG 1422 0.4332 MADLKERLLPPKPASALNVREVAANRPSASGRQAFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTATGVGEVWPSEGSDMNRRRGSRNFDNVFSNSSPDYLPFEFRALEVALEAACTFLDSQVHCGGKWETVVDSRYGILLYAKEVNHRSYAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIALFNVPSAFQWVLIITGICGVFIFSAFVWFFKYRRLMPL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00042 473 FunFam Magnesium transporter MRS2-1 411 471 - -
Vian11g00042 473 CDD Mrs2_Mfm1p-like 53 470 IPR039204 -
Vian11g00042 473 Gene3D Magnesium transport protein CorA, transmembrane region 127 202 - -
Vian11g00042 473 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 410 463 IPR045863 -
Vian11g00042 473 Gene3D Magnesium transport protein CorA, transmembrane region 218 404 - -
Vian11g00042 473 Gene3D Magnesium transport protein CorA, transmembrane region 411 471 - -
Vian11g00042 473 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 227 471 IPR039204 -
Vian11g00042 473 Gene3D - 41 124 - -
Vian11g00042 473 Coils Coil 254 281 - -
Vian11g00042 473 FunFam Magnesium transporter MRS2-1 41 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00042 Vian-Chr11 370159 373775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00042 1 473 MRS2 Gene Family AT1G16010 80.550 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00042 K16075 - gmx:100779803 760.755