Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00031 ATGGTGCAACCTGCGGAGGCGACACAGCGGAAGGTGTTGTGGAACTCAGATCTGGATTTGCTGATAACATATTTCAAATGTGGAGGGGTGTCATTAGGTGTTGGTCTGCAACACCACGTGGCAGATGGAGCATCCGGGATTCAGTTCATCAATGCATGGTCCGATGTGGCTCGTGGCTTAGACATTTCCGTTCCTCCGTTCATTGACAAGACCCTACTTCGTGCCAGGGACCCACCTCAACCTGTTTTTCCTCACCACGAATACCAGCTCTCACCACCCGCCGCTGCCACCACCACCACTACTGTAGTTGCCTCTATCTTAAAATTGACTCGTCACCAACTGGACACCCTCAAGGATAAGTGGAAAGAAGGTGGCAACAGCATCAAATATAGCACTTACGAGATGTTGGCAGCTCATATATGGATAAGTGTGTGCAAAGCAAGAGGCCTTGGTGCTGAGCAAGAAACCAGACTGTATATTCCGATTGATGGAAGGGGGAGGCTGCAACCTCCCCTCCCTCCTGGTTACTTTGGCAATGTCATTTTCTCCACCATTCCCGTCGCAGTGGTAGGAGAACTCGTGTCAAAACCTACATGGTATGCTGCGGACAAAATCCATAAAGCAATAATGAGAATGGACAACGAATATTTGAGGTCAGCTGTTGACTATCTAGAGCTACAACCTGATCTGAATGGTCTTGTTCGTGGGGCACATACTTTTGCTTGTCCAAATGTTGGTATCAATAGCTGGGTCAAGTTTCCGATCTATGATGCTGACTTTGGTTGGGGAAGACCCATCTTCATGAGACCTGGTTGGATTATACACGAGGGGCTATCAATCATAATTCCAACCTCAACAAATGATGGCAGCTTATACTTGACAATTGCTCTACCACCTCACCATATGAACTTGTTTCAACAATTCTTTTTTGACATTTGA 939 0.4686 MVQPAEATQRKVLWNSDLDLLITYFKCGGVSLGVGLQHHVADGASGIQFINAWSDVARGLDISVPPFIDKTLLRARDPPQPVFPHHEYQLSPPAAATTTTTVVASILKLTRHQLDTLKDKWKEGGNSIKYSTYEMLAAHIWISVCKARGLGAEQETRLYIPIDGRGRLQPPLPPGYFGNVIFSTIPVAVVGELVSKPTWYAADKIHKAIMRMDNEYLRSAVDYLELQPDLNGLVRGAHTFACPNVGINSWVKFPIYDADFGWGRPIFMRPGWIIHEGLSIIIPTSTNDGSLYLTIALPPHHMNLFQQFFFDI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00031 312 Pfam Transferase family 21 307 - -
Vian11g00031 312 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 22 307 - -
Vian11g00031 312 Gene3D - 87 312 IPR023213 -
Vian11g00031 312 FunFam Tryptamine hydroxycinnamoyl transferase 89 310 - -
Vian11g00031 312 Gene3D - 20 86 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00031 Vian-Chr11 295259 296629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00031 18 312 Monolignol Biosynthesis Gene Families AT5G48930 65.017 2.75e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00031 K13065 - gmx:100801923 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00031 11 295259 296629 Vian9g00031 9 301865 303456 PCT