Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00014 ATGCATTCCACCATCTTCACCATGTGGCTTATTTTCTTGTCTTGCTTCTTTTGTGCTGTATCTGCACTCAACTCCGATGGGGTCACCCTGTTGTCACTCATGAGGCACTGGAAATCCGTGCCTACTTCCATAAACACCACCTGGCTTGCCTCTGATTCCACTCCATGCTCCTCCTGGGTAGGACTTCAATGTGACCATGCCCACCATGTCATCTACCTTAACCTCACAGGTTATGGGATTTCTGGTCAATTAGGTCCTGAAATTGGAAATATTTCTCGCCTACAGTACTTAGACCTTACAGGTAACAACCTCAATGGCCCAATACCTCACTCCTTAAAAAACTTGCACAGCCTCCAGTTTCTCAGCCTTGCTCAAAATCAGCTATCTGGTGAAATTCCACATTCCTTGTCTCAAATACCTGGACTGCAGCTTGTTGATCTATCATCTAACCTTTTAAGGGGTTCCATCCCCACCAGCATTGGGAACATGTCTGAGCTCCTGCTGTTGTATCTCCAGAGTAACCAGTTGTCTGAGACAATTCCTTCATCCATTGGGAATTGCAGTAAATTGCTAGAATTGTATCTGGATAGGAATCAGTTGGAGGGTGTCCTGCCTCAGAGTCTAAATAATCTCGGTCTTCTGGATCATTTTGTTGTCTCCGGTAATAGACTTACGGGTACTGTTTCTTTGGGTTCAACTAGTTGCAAAAATTTAGTAGTTTTGGATCTCTCAGACAATGACTTTAGTGGTGGCCTTCCCTCAAGCATGGGGAACTGTAGTAGTTTATCGGAACTTGTTGCCGTGAACTGCAATTTGATAGGGAATATTCCACCCTCCTTTGGCCTACTGACCAAGCTTTCTATTCTATATCTTCCACTAAACCGTTTATCTGGAAAAATACCTCCAGAAATTGGCAACTGCAACTCTCTAACAGAGTTACAGCTGTATTCCAATCGACTTGAGGGAAACATTCCAAGTGAGTTGGGAAAACTAAGAAAACTGGTGGATTTGCAATTGTTTTCAAATCAATTGACAGGTGAAATTCCACTCAGCATCTGGAAGATTAAAGGTCTTCAGTCTCTGCATCTGTATAATAACAGTCTTTCTGGAGAATTGCCATTGGAGATTGCAGAGCTCAGACAGCTGAAAAACATCACTTTGTTTAACAACCAGTTTTCCGGTGTCATACCTCAAAACTTGGGAATTAACAGCAGTTTAGTTCTGTTGGACTTCACAAGTAATAAATTCACTGGCAACATCCCACCAAATCTGTGTTTTGGCAAGAAGTTAAAGATCCTGAATTTGGGCATCAATCAACTTCAAGGTAGCGTACCTCCTTATGTTGGGAGCTGTACAACCCTTACAAGATTAATCCTCAAACAGAATAATTTTACTGGGCCTCTTCCTCATTTTAAGAGCTGTCAAAATCTCGTTTATATGGAAATTGGCAACAACAAAATTCATGGAGCAATTCCATTAAGTTTGGGAAACTGCACACGTATCACTGACTTAATTCTGCCCATGAACAAATTTACAGGGCCAATACCATCAGAGCTAGGGAACCTAGTGAATCTTCGGACTTTGAATCTGGCTCACAACAACTTAGAAGGTCCTTTGCCCTCTCAGCTATCAAAGTGCACCCAAATGGACAAGTTTGATGTCGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTCTGCAGAGCTGGACAAGGTTAACCACATTAATTTTGAGCGAGAATCGCTTTAGTGGGGGCCTCCCATCTTTCCTGTCGGAATTCAAGATGATTTCTGAGCTACAACTTGGTGGCAATCTGTTCGGAGGCAAAATTCCCATATCAGTTGGAGCAATGCAGAACTTGATCTATGGTTTGAATCTAAGTTCAAATGGGTTGACTGGTGAAATTCCTGTAGAGATTAGGAACCTGAAAATGTTGCGAACACTAGCTCTGTCTCATAACAATTTGACAGGAAGCATAGAAGTTCTTGGTGAACTCATCTCCTTAGTGGAACTCAATATTTCATACAATTCTTTTAGTGGTATTGTACCAAAGGCGCTGATGAAGTTGCTTAATTGTCCCTTGTCATCGTTTCTGGGCAATCCTGGCCTATGCATCAGATGTTCAACGTCAGATTGCTTGGCTTGCTCGGAAAGAAGCTCTCTAAAATCATGCGATGACAAATCTGCTAAACGGAAAGGCTTGAGTAAAGTTCAAATTGTGAAGATGTTTCTTGGATTATCCATATTTCTTGGTTTGTCGTTGCTGGCATTAGTTTGTGTTGTTGTTTTTGGGAGAACAGCTAAGCAGGAAAACCATATCTCTTCTGAACAGGGTTCTTCATCCCTTCTTAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATCGATATATTATTGGTAGAGGAGCCCACGGAATTGTTTATAAAGTTCTGATAGGTCCAGACAAAGCTTTTGCGGTGAAAAAGATAAGATTTACTGCCAGTCAAGGTAAGAACTCGAGCATGGCCAGAGAAATTCAGACCCTTGGGAAAATCAGGCATCGAAATCTTGTCAAATTGGAAGACTTTTGGTTGAGAAAAGATTGTGGTCTAATTTTGTACAGCTACATGGCAAATGGAAAGAATGCTTATGCAACAAGTAGTAGGGAGTCTGATGTGTACAGCTACGGGGTTGTTTTGCTTGAGCTGATAACAAGAAAGAAGGCAGCCACAGATCCTTCGTATGAGGATGGTGTTTTGGTGGATTGGGTTAGGTCTGTCTGGAGGGAAACAGGACAAATTCATCAAATTGCTGATTCAATACTTTCCTGCGAATTTGCTGATACCCATATAATGGAAAACCTTACTAAAGTGCTTATGGTTGGTTTGAGATGTACTGAGAAGGATCCACACAAGAGACCCACAATGAGAGATGTTATTAATCAATTAAACTAG 2937 0.415 MHSTIFTMWLIFLSCFFCAVSALNSDGVTLLSLMRHWKSVPTSINTTWLASDSTPCSSWVGLQCDHAHHVIYLNLTGYGISGQLGPEIGNISRLQYLDLTGNNLNGPIPHSLKNLHSLQFLSLAQNQLSGEIPHSLSQIPGLQLVDLSSNLLRGSIPTSIGNMSELLLLYLQSNQLSETIPSSIGNCSKLLELYLDRNQLEGVLPQSLNNLGLLDHFVVSGNRLTGTVSLGSTSCKNLVVLDLSDNDFSGGLPSSMGNCSSLSELVAVNCNLIGNIPPSFGLLTKLSILYLPLNRLSGKIPPEIGNCNSLTELQLYSNRLEGNIPSELGKLRKLVDLQLFSNQLTGEIPLSIWKIKGLQSLHLYNNSLSGELPLEIAELRQLKNITLFNNQFSGVIPQNLGINSSLVLLDFTSNKFTGNIPPNLCFGKKLKILNLGINQLQGSVPPYVGSCTTLTRLILKQNNFTGPLPHFKSCQNLVYMEIGNNKIHGAIPLSLGNCTRITDLILPMNKFTGPIPSELGNLVNLRTLNLAHNNLEGPLPSQLSKCTQMDKFDVGFNFLNGSLPSSLQSWTRLTTLILSENRFSGGLPSFLSEFKMISELQLGGNLFGGKIPISVGAMQNLIYGLNLSSNGLTGEIPVEIRNLKMLRTLALSHNNLTGSIEVLGELISLVELNISYNSFSGIVPKALMKLLNCPLSSFLGNPGLCIRCSTSDCLACSERSSLKSCDDKSAKRKGLSKVQIVKMFLGLSIFLGLSLLALVCVVVFGRTAKQENHISSEQGSSSLLNKVMEATENLNDRYIIGRGAHGIVYKVLIGPDKAFAVKKIRFTASQGKNSSMAREIQTLGKIRHRNLVKLEDFWLRKDCGLILYSYMANGKNAYATSSRESDVYSYGVVLLELITRKKAATDPSYEDGVLVDWVRSVWRETGQIHQIADSILSCEFADTHIMENLTKVLMVGLRCTEKDPHKRPTMRDVINQLN 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00014 978 Gene3D Ribonuclease Inhibitor 137 231 IPR032675 -
Vian11g00014 978 ProSiteProfiles Protein kinase domain profile. 794 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00014 978 FunFam Leucine-rich repeat receptor protein kinase EMS1 134 231 - -
Vian11g00014 978 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Vian11g00014 978 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 326 424 - -
Vian11g00014 978 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Vian11g00014 978 Gene3D Ribonuclease Inhibitor 330 403 IPR032675 -
Vian11g00014 978 Pfam Leucine Rich Repeat 524 546 IPR001611 GO:0005515
Vian11g00014 978 Gene3D Phosphorylase Kinase; domain 1 764 867 - -
Vian11g00014 978 Gene3D Transferase(Phosphotransferase) domain 1 868 978 - -
Vian11g00014 978 Pfam Protein kinase domain 799 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00014 978 Gene3D Ribonuclease Inhibitor 232 327 IPR032675 -
Vian11g00014 978 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 324 - -
Vian11g00014 978 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 761 870 - -
Vian11g00014 978 FunFam Leucine-rich repeat receptor-like kinase 27 133 - -
Vian11g00014 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 882 977 - -
Vian11g00014 978 SMART LRR_typ_2 666 689 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 188 210 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 283 307 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 522 546 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 163 187 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 115 139 IPR003591 -
Vian11g00014 978 SMART LRR_typ_2 643 665 IPR003591 -
Vian11g00014 978 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Vian11g00014 978 SUPERFAMILY RNI-like 73 393 - -
Vian11g00014 978 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Vian11g00014 978 Gene3D Ribonuclease Inhibitor 404 715 IPR032675 -
Vian11g00014 978 SUPERFAMILY L domain-like 382 714 - -
Vian11g00014 978 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 428 714 - -
Vian11g00014 978 SUPERFAMILY Protein kinase-like (PK-like) 782 977 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00014 Vian-Chr11 180767 184096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00014 875 977 Receptor kinase-like Gene Family AT1G73080 44.037 1.28e-18 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vian11g00014 Pkinase 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00014 - - vum:124843252 1714.51