Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vian11g00014 | ATGCATTCCACCATCTTCACCATGTGGCTTATTTTCTTGTCTTGCTTCTTTTGTGCTGTATCTGCACTCAACTCCGATGGGGTCACCCTGTTGTCACTCATGAGGCACTGGAAATCCGTGCCTACTTCCATAAACACCACCTGGCTTGCCTCTGATTCCACTCCATGCTCCTCCTGGGTAGGACTTCAATGTGACCATGCCCACCATGTCATCTACCTTAACCTCACAGGTTATGGGATTTCTGGTCAATTAGGTCCTGAAATTGGAAATATTTCTCGCCTACAGTACTTAGACCTTACAGGTAACAACCTCAATGGCCCAATACCTCACTCCTTAAAAAACTTGCACAGCCTCCAGTTTCTCAGCCTTGCTCAAAATCAGCTATCTGGTGAAATTCCACATTCCTTGTCTCAAATACCTGGACTGCAGCTTGTTGATCTATCATCTAACCTTTTAAGGGGTTCCATCCCCACCAGCATTGGGAACATGTCTGAGCTCCTGCTGTTGTATCTCCAGAGTAACCAGTTGTCTGAGACAATTCCTTCATCCATTGGGAATTGCAGTAAATTGCTAGAATTGTATCTGGATAGGAATCAGTTGGAGGGTGTCCTGCCTCAGAGTCTAAATAATCTCGGTCTTCTGGATCATTTTGTTGTCTCCGGTAATAGACTTACGGGTACTGTTTCTTTGGGTTCAACTAGTTGCAAAAATTTAGTAGTTTTGGATCTCTCAGACAATGACTTTAGTGGTGGCCTTCCCTCAAGCATGGGGAACTGTAGTAGTTTATCGGAACTTGTTGCCGTGAACTGCAATTTGATAGGGAATATTCCACCCTCCTTTGGCCTACTGACCAAGCTTTCTATTCTATATCTTCCACTAAACCGTTTATCTGGAAAAATACCTCCAGAAATTGGCAACTGCAACTCTCTAACAGAGTTACAGCTGTATTCCAATCGACTTGAGGGAAACATTCCAAGTGAGTTGGGAAAACTAAGAAAACTGGTGGATTTGCAATTGTTTTCAAATCAATTGACAGGTGAAATTCCACTCAGCATCTGGAAGATTAAAGGTCTTCAGTCTCTGCATCTGTATAATAACAGTCTTTCTGGAGAATTGCCATTGGAGATTGCAGAGCTCAGACAGCTGAAAAACATCACTTTGTTTAACAACCAGTTTTCCGGTGTCATACCTCAAAACTTGGGAATTAACAGCAGTTTAGTTCTGTTGGACTTCACAAGTAATAAATTCACTGGCAACATCCCACCAAATCTGTGTTTTGGCAAGAAGTTAAAGATCCTGAATTTGGGCATCAATCAACTTCAAGGTAGCGTACCTCCTTATGTTGGGAGCTGTACAACCCTTACAAGATTAATCCTCAAACAGAATAATTTTACTGGGCCTCTTCCTCATTTTAAGAGCTGTCAAAATCTCGTTTATATGGAAATTGGCAACAACAAAATTCATGGAGCAATTCCATTAAGTTTGGGAAACTGCACACGTATCACTGACTTAATTCTGCCCATGAACAAATTTACAGGGCCAATACCATCAGAGCTAGGGAACCTAGTGAATCTTCGGACTTTGAATCTGGCTCACAACAACTTAGAAGGTCCTTTGCCCTCTCAGCTATCAAAGTGCACCCAAATGGACAAGTTTGATGTCGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTCTGCAGAGCTGGACAAGGTTAACCACATTAATTTTGAGCGAGAATCGCTTTAGTGGGGGCCTCCCATCTTTCCTGTCGGAATTCAAGATGATTTCTGAGCTACAACTTGGTGGCAATCTGTTCGGAGGCAAAATTCCCATATCAGTTGGAGCAATGCAGAACTTGATCTATGGTTTGAATCTAAGTTCAAATGGGTTGACTGGTGAAATTCCTGTAGAGATTAGGAACCTGAAAATGTTGCGAACACTAGCTCTGTCTCATAACAATTTGACAGGAAGCATAGAAGTTCTTGGTGAACTCATCTCCTTAGTGGAACTCAATATTTCATACAATTCTTTTAGTGGTATTGTACCAAAGGCGCTGATGAAGTTGCTTAATTGTCCCTTGTCATCGTTTCTGGGCAATCCTGGCCTATGCATCAGATGTTCAACGTCAGATTGCTTGGCTTGCTCGGAAAGAAGCTCTCTAAAATCATGCGATGACAAATCTGCTAAACGGAAAGGCTTGAGTAAAGTTCAAATTGTGAAGATGTTTCTTGGATTATCCATATTTCTTGGTTTGTCGTTGCTGGCATTAGTTTGTGTTGTTGTTTTTGGGAGAACAGCTAAGCAGGAAAACCATATCTCTTCTGAACAGGGTTCTTCATCCCTTCTTAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATCGATATATTATTGGTAGAGGAGCCCACGGAATTGTTTATAAAGTTCTGATAGGTCCAGACAAAGCTTTTGCGGTGAAAAAGATAAGATTTACTGCCAGTCAAGGTAAGAACTCGAGCATGGCCAGAGAAATTCAGACCCTTGGGAAAATCAGGCATCGAAATCTTGTCAAATTGGAAGACTTTTGGTTGAGAAAAGATTGTGGTCTAATTTTGTACAGCTACATGGCAAATGGAAAGAATGCTTATGCAACAAGTAGTAGGGAGTCTGATGTGTACAGCTACGGGGTTGTTTTGCTTGAGCTGATAACAAGAAAGAAGGCAGCCACAGATCCTTCGTATGAGGATGGTGTTTTGGTGGATTGGGTTAGGTCTGTCTGGAGGGAAACAGGACAAATTCATCAAATTGCTGATTCAATACTTTCCTGCGAATTTGCTGATACCCATATAATGGAAAACCTTACTAAAGTGCTTATGGTTGGTTTGAGATGTACTGAGAAGGATCCACACAAGAGACCCACAATGAGAGATGTTATTAATCAATTAAACTAG | 2937 | 0.415 | MHSTIFTMWLIFLSCFFCAVSALNSDGVTLLSLMRHWKSVPTSINTTWLASDSTPCSSWVGLQCDHAHHVIYLNLTGYGISGQLGPEIGNISRLQYLDLTGNNLNGPIPHSLKNLHSLQFLSLAQNQLSGEIPHSLSQIPGLQLVDLSSNLLRGSIPTSIGNMSELLLLYLQSNQLSETIPSSIGNCSKLLELYLDRNQLEGVLPQSLNNLGLLDHFVVSGNRLTGTVSLGSTSCKNLVVLDLSDNDFSGGLPSSMGNCSSLSELVAVNCNLIGNIPPSFGLLTKLSILYLPLNRLSGKIPPEIGNCNSLTELQLYSNRLEGNIPSELGKLRKLVDLQLFSNQLTGEIPLSIWKIKGLQSLHLYNNSLSGELPLEIAELRQLKNITLFNNQFSGVIPQNLGINSSLVLLDFTSNKFTGNIPPNLCFGKKLKILNLGINQLQGSVPPYVGSCTTLTRLILKQNNFTGPLPHFKSCQNLVYMEIGNNKIHGAIPLSLGNCTRITDLILPMNKFTGPIPSELGNLVNLRTLNLAHNNLEGPLPSQLSKCTQMDKFDVGFNFLNGSLPSSLQSWTRLTTLILSENRFSGGLPSFLSEFKMISELQLGGNLFGGKIPISVGAMQNLIYGLNLSSNGLTGEIPVEIRNLKMLRTLALSHNNLTGSIEVLGELISLVELNISYNSFSGIVPKALMKLLNCPLSSFLGNPGLCIRCSTSDCLACSERSSLKSCDDKSAKRKGLSKVQIVKMFLGLSIFLGLSLLALVCVVVFGRTAKQENHISSEQGSSSLLNKVMEATENLNDRYIIGRGAHGIVYKVLIGPDKAFAVKKIRFTASQGKNSSMAREIQTLGKIRHRNLVKLEDFWLRKDCGLILYSYMANGKNAYATSSRESDVYSYGVVLLELITRKKAATDPSYEDGVLVDWVRSVWRETGQIHQIADSILSCEFADTHIMENLTKVLMVGLRCTEKDPHKRPTMRDVINQLN | 978 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vian11g00014 | 978 | Gene3D | Ribonuclease Inhibitor | 137 | 231 | IPR032675 | - | |
Vian11g00014 | 978 | ProSiteProfiles | Protein kinase domain profile. | 794 | 978 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian11g00014 | 978 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 134 | 231 | - | - | |
Vian11g00014 | 978 | ProSitePatterns | Protein kinases ATP-binding region signature. | 800 | 823 | IPR017441 | GO:0005524 | |
Vian11g00014 | 978 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 326 | 424 | - | - | |
Vian11g00014 | 978 | Gene3D | Ribonuclease Inhibitor | 27 | 136 | IPR032675 | - | |
Vian11g00014 | 978 | Gene3D | Ribonuclease Inhibitor | 330 | 403 | IPR032675 | - | |
Vian11g00014 | 978 | Pfam | Leucine Rich Repeat | 524 | 546 | IPR001611 | GO:0005515 | |
Vian11g00014 | 978 | Gene3D | Phosphorylase Kinase; domain 1 | 764 | 867 | - | - | |
Vian11g00014 | 978 | Gene3D | Transferase(Phosphotransferase) domain 1 | 868 | 978 | - | - | |
Vian11g00014 | 978 | Pfam | Protein kinase domain | 799 | 877 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vian11g00014 | 978 | Gene3D | Ribonuclease Inhibitor | 232 | 327 | IPR032675 | - | |
Vian11g00014 | 978 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 232 | 324 | - | - | |
Vian11g00014 | 978 | FunFam | LRR receptor-like serine/threonine-protein kinase RPK2 | 761 | 870 | - | - | |
Vian11g00014 | 978 | FunFam | Leucine-rich repeat receptor-like kinase | 27 | 133 | - | - | |
Vian11g00014 | 978 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 882 | 977 | - | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 666 | 689 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 188 | 210 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 283 | 307 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 522 | 546 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 163 | 187 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 115 | 139 | IPR003591 | - | |
Vian11g00014 | 978 | SMART | LRR_typ_2 | 643 | 665 | IPR003591 | - | |
Vian11g00014 | 978 | Pfam | Leucine rich repeat | 92 | 152 | IPR001611 | GO:0005515 | |
Vian11g00014 | 978 | SUPERFAMILY | RNI-like | 73 | 393 | - | - | |
Vian11g00014 | 978 | ProSiteProfiles | Leucine-rich repeat profile. | 645 | 667 | IPR001611 | GO:0005515 | |
Vian11g00014 | 978 | Gene3D | Ribonuclease Inhibitor | 404 | 715 | IPR032675 | - | |
Vian11g00014 | 978 | SUPERFAMILY | L domain-like | 382 | 714 | - | - | |
Vian11g00014 | 978 | FunFam | Leucine-rich repeat receptor-like protein kinase PEPR1 | 428 | 714 | - | - | |
Vian11g00014 | 978 | SUPERFAMILY | Protein kinase-like (PK-like) | 782 | 977 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vian11g00014 | Vian-Chr11 | 180767 | 184096 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vian11g00014 | 875 | 977 | Receptor kinase-like Gene Family | AT1G73080 | 44.037 | 1.28e-18 | 89.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Vian11g00014 | Pkinase | 1.2e-09 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vian11g00014 | - | - | vum:124843252 | 1714.51 |