Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian11g00005 ATGTGGCATCCACATCCTAAAGGATCAGGGATTAGAAAGGGAGTAGGAGGAGGAGGAGGAGGTAATGGAATAGTAGCAGTGGCTATAGACAAGGATAAAGGAAGCCATTACGCTCTTAAATGGGCTGTTGATTGTCTGCTTGGCAGAGGTCAGACTTTGATTCTCCTCCACGTTTTGCACGGGACATCCTCACATGTTTCCAGGGGTAGCGAGGCCCTTGTTTGTAACATCGCCAATTCATCTGCGTATCCACAGAGATACCAACTTGATACCACTATCAAGGATTTGTTTCTCACTTTCCACTGCTATTGTACACGCAAAGATATACACTGCCTTGATGTCCTACTTGAAGACAATGATGTTGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCGATTGAAAACTTGGTGATTGGTGCAACATCCAGGCATGGGTTTATTCGATTTAAGTCATCATCATGTGCATCAACTAGCATATCAAAGGGGGCGCCGGACTTTTGTACCGTGTTCATCATTTCAAAGGGAAAAATCTCGTCAGTTCGGAATGCTACTCGTCCAGCCGCGCATACATCCCCACTTCTGATCCATATACGTAATCTAAAGAATAAGGACGAAAATCATCAAGAAATACCCTTCAGAAATACAAATACGAAAGACAGGACGCCATTCAAACCTCAGAGCTGGCACGATGAATCTATTCAGTCTCCATTTCCAAGAGGAAGAGGCACGAATAGATTGTCATGCGTGGACTTCCCAGACTCAGATACGGAAATATCATTTGTAAGCTCCGATAGGCCAAGCAGTTGTCGTTCGTCCTCCGTTTATGACTATATTGACGCAAGCCGAACTCCGCGGGCTTCTACCAGTTCAGATCATAGCTGTGGATCAACCCGATTAGGACTCAAGTTCAATGACCTCGGTTCACCCGATACCTCATTTTCTCACGAAAGCAGTAGAACATCATTCTCATATTCATCACAGAGCATGGATGAAGAAGCAGCAGAAGCTGATATGAAGAGGCTGAAGCTTGAGTTAAAGCAAACGATGGATATGTACAGTAAAGCATGCAGAGAAGCACTAACAGCCCAGCATAAGTTAGTGGAGTTGACACACTGGAGAATTGAGGAAGAAAAAAAATTGGATGAGGCACGATTGGCTGAGGAAGCTGCGCTGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCGTCGAAGAAAATTGCTGAGGTTGAAACACACAAAAGAGCGACTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTTTTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCCCAGAAAATCGGAGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGGTTGACATTCTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTGGGAGCATGTCCGGAGTATGGCATATTGATATATGAATATATGGCTAATGGAAGCCTAGAAGATTGCCTGTTTCGAAAAATGACGAACAAGGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAACGACGGGCCTTCTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTAGCAAGGCTTGTCCCAGCAGTTGCGGAAGACGTGACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTATTCTCTAGGAATAATTTTTCTTCAACTATTGACTGGCAGACCTCCAATGGGTTTAGCTCACCATGCCGGGCAGGCTATAGAGAAAGAAACCTTTGAGGAAATGCTGGACCCCTCTGTAACCGATTGGCCTCTTCAACAAGCCTTGTGCCTTGCAAACATAGCAGTCAAATGTGCGGAACTTAGACGAAAAGATAGGCCAGACCTTGCCAAAGTGGTGTTGCCAGAGCTCGACAAATTGAGAGACTTTGCAGAAGAAAACATGACACTGCGATTGTTTCCCATCAATTTAGGATGCACTGCGCCCTCTCCCTGCCACAGTGAAACTTCTGTGCAACAGGATGTGATAAGCGACCCGCGCCTTGTACATTCCGTAGGCTCATCAGCTCCATCAACTCCTACAGAAGAAAAACATTAA 2370 0.4485 MWHPHPKGSGIRKGVGGGGGGNGIVAVAIDKDKGSHYALKWAVDCLLGRGQTLILLHVLHGTSSHVSRGSEALVCNIANSSAYPQRYQLDTTIKDLFLTFHCYCTRKDIHCLDVLLEDNDVVKAITEYVSYAAIENLVIGATSRHGFIRFKSSSCASTSISKGAPDFCTVFIISKGKISSVRNATRPAAHTSPLLIHIRNLKNKDENHQEIPFRNTNTKDRTPFKPQSWHDESIQSPFPRGRGTNRLSCVDFPDSDTEISFVSSDRPSSCRSSSVYDYIDASRTPRASTSSDHSCGSTRLGLKFNDLGSPDTSFSHESSRTSFSYSSQSMDEEAAEADMKRLKLELKQTMDMYSKACREALTAQHKLVELTHWRIEEEKKLDEARLAEEAALAIAEKEKARCRAAMETAEASKKIAEVETHKRATVEVKALKEAEEMRKLLDNLAQTDVRYRRYCIEEIEAATNFFSESQKIGEGGYGPVFKCFLDHTPVAVKVLRPDAAQGKSQFQQEVDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKMTNKVLSWQLRFRIAAEITTGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAEDVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHAGQAIEKETFEEMLDPSVTDWPLQQALCLANIAVKCAELRRKDRPDLAKVVLPELDKLRDFAEENMTLRLFPINLGCTAPSPCHSETSVQQDVISDPRLVHSVGSSAPSTPTEEKH 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian11g00005 789 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 438 538 - -
Vian11g00005 789 CDD STK_N 24 176 - -
Vian11g00005 789 MobiDBLite consensus disorder prediction 213 237 - -
Vian11g00005 789 Gene3D HUPs 24 173 IPR014729 -
Vian11g00005 789 FunFam Os07g0541700 protein 539 631 - -
Vian11g00005 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 153 - -
Vian11g00005 789 MobiDBLite consensus disorder prediction 760 789 - -
Vian11g00005 789 Pfam Protein kinase domain 467 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00005 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
Vian11g00005 789 Pfam Universal stress protein family 24 155 IPR006016 -
Vian11g00005 789 PANTHER OS02G0152300 PROTEIN 25 754 - -
Vian11g00005 789 SUPERFAMILY Protein kinase-like (PK-like) 450 724 IPR011009 -
Vian11g00005 789 ProSiteProfiles Protein kinase domain profile. 466 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00005 789 Coils Coil 332 359 - -
Vian11g00005 789 Coils Coil 392 412 - -
Vian11g00005 789 Gene3D Transferase(Phosphotransferase) domain 1 539 742 - -
Vian11g00005 789 MobiDBLite consensus disorder prediction 311 330 - -
Vian11g00005 789 Gene3D Phosphorylase Kinase; domain 1 444 538 - -
Vian11g00005 789 SMART serkin_6 466 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian11g00005 789 MobiDBLite consensus disorder prediction 216 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian11g00005 Vian-Chr11 79452 83359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian11g00005 1 762 Receptor kinase-like Gene Family AT1G78940 56.833 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vian11g00005 Pkinase 7.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian11g00005 - - gmx:100801601 1192.56