Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01891 ATGGAGTGTCTCTTTGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGTTGCTCTAAAAATTTCGTCAAAAGGCTTGAAGAAGAAGAGAGCAATTTGATTATAACGAAAGATAGTGTCCAAAAATTTGTTACGCACAACAAGAAACAAGCGAGAAAGCCCAGTGAAATTGTGGACAAGTGGCTGGAAGATGCTATCAATGATGTACACAATGTCAATCAGTTGCTGGAAGAGGCAAGAACACAAAAACATTGTTGCTTTGGGCACTGCCCAAATTGGATTTGGCGATATCATGTTGGAAAAAAGTTAGCAAACAAAACTATGCACCTCGAAAAGTTCATTAAAGAGGGCAGAGAATATGTGCCATTTGACCGCATCGCTACGCTTCCTTCAAACACCCTTGATATTCTTTCAGAAAAATGCATGAATTTTGAGAGTAGACAATCTGCTTATGAGCAACTACTTGATGCAGTGAAAAATAATGATGTTTCCATGATTGGGTTGTATGGGATGGGAGGTTGTGGTAAAACCACATTAGCAATGGAGGTTAGGAAATTAGTAGAAGCAGAGCATCTTTTTGACAAAGTTCTTTTTGTACCTGTTTCTAGTACCGTGGAAGTTCAGAGGATTCAAGAAAAAATAGCAAGTTCACTGCCATTTGAATTTCCAGAAACCGAAGAAATGCAGAGAGCCCAAAGATTGTGCTCAAGATTAACTCAAGAGAAAAATATTTTTATAATTCTCGATGATGTGTGGCACAACCTTGACTTTGGTCGTATTGGGATTCCTTCATCTGAACACCATAAAGGATGCAAGATTCTCATTACCAGTAGATCAGAAGCAGTTTGTACTTTAATGGACTGTCAACGAAAGATTTACTTGCCAATTTTAACGGATGAAGAAGCATGGACTCTTTTCCAAAATAAAGCACTTATAACAGAAGCCACCTCTGATACCTTAAAGGATCTGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCGGTTGCCATTGCAGCTGTTGCTTGTAGTTTGAAGGGAAAAGCTGAGACGGTATGGAGGGTTGCATTGAATAAATTGAGACATTCTAAGCCAATAAATATTGAAAGAGGTTTGACTGATCCCTACAAGTGCCTGCAGTTGAGCTATGATAATTTGGATGATAAAGAAGCTAAATCACTTTTCCTGTTGTGCTCTGTGTTTCCTGAAGATTCTGAAATTATAGTTGAACGTTTAGTAAGATGTGCAATAGGATTAGGTGTAGTTGGAGAAGTTGACTCATATGAAGAGGCAAGGAATGAAGTGATTGCAGCTAAAATTAAGCTTGTTAGTTGTTGTTTATTGTTGGATGCAGATGATGAACGTGTCAAAATGCATGACATAGTTCGTGATGTGGCCCACATAATAGCAAAAGATGAGAATAAGATGATCAAGTGTGAAGTGGAGAAAGATGTTAGAGTGGAACAAAATTCAGTTAGATATCTATGGTGTGTGAAATTTCCAAATGATTTGGATTGCTCCAATCTTGAATTTTTATGCTTACGGACAAAGATGAAAGAATTTGATGGGATTTTCAAAAGAATGGGAATGCTCAAAGTTTTGATTCTTGTCAACGATGAGTATGGAAGAACACCATTGTTAACAATATCTTTCGAAACATTAACAAATCTTCGTTATCTATTCATTCTGAATTATGAATTGAGCGACTTCTCATTTTTAGGCGGTATGAAGAATCTTCAAAGTCTCTCGTTATATAATTGTTTACTGCCTTCATTTCCTGAATTACAAACGGATGTTGCGATTACACTAAAATTGTTAGACTTAAATGGATGTAACATTAAAGTGAAGAATTTTGAAGTGATTAAAAGAATCCCGCTTTTGGAAGAGTTGTACATCATTGAAATTGAAGGAGAATGGGATGCTAACAGTGTAGACAATATTGAATTCTTTAAGACGTTTAGCATTCCCGAAACACTGCAAAGGTATGGAATTGTATTAGGACCTTTTGGTTTTGAGGATTTTGATGGTAGAGATATTTACATTCATGGCAGAACTTTATTACTTAACCATTTTGACATATCAAATGAGGTAATAAAGGGTTTGGCAAAAAGAGCAAAGGATCTATTCGTGGCAACTATTCATGGAGGTGCAAAAAATATCATCCCTGATATATTTCAACTTGAAGGAGGAGGTTTGGATGAGTTGAATAAGTTGAAGATACGTGATTCTGAAGAGTTAGAATGTTTGATTGACACTCATAGTCACTCGAGTGAGGTGGTAACTCTCTTCTCCAAGTTGCATACGCTTGGAATTGAGAACATGAGAAATCTAAGAGTTATATGGCATTGTTTTCTTCCTGCCAATGGGCCTTTTGAGAAGTTAGAGAAGCTGTATTTAAGTGATTGTCCACGTCTGACATCTCTCTTCACGTATGTTGTTGCTCGAAGTTTGATAAAATTGAAAATATTAGAAATATCAAGATGTGATGAACTGAAGTATATATTAGCAGATGATGACAAAACGGAGGAAGGTGAAGATGAATTCACCACAGGGCATCCTGTACAAATTTTCCAAAATCTGCAGGATGTACAGATAAATAGCTGTCGAGAATTAAAACATATATTCCCAGCCAACATTGTTGGAGGGTTAGGTCAATTGAAAGTGCTCATGATAGAAGAATGTGACAAGCTAGATCAAATAATTGGAGATATTGTTCCATCAACAGACCGTGATAAAGTAATAGAGGAAGGAACTCTATCCAGCCTTACAAGTCTTATGATAGAACGTTGTGGGAAGTTAGGCTCAATTTTTACAGCATCTATAGCTAAGAACTTGACTTCTTTGGAAGAATTGTACATACGAAGGTGCAAAAGTTTGAAGGATATAGTAACTCACGAAAGGGTCAATAAAAATCAAGAGGAAAGCATTGTTGAGGATGAGCATGATGTTCAGAGTGATATTTCAATCTTCCAAAGTTTGAAAAACCTACGTATCATTGATTGTGTGTTATTGGAGGGTATATTCCCTGTTTCTTTTGTTGGAGAATTGAATGATATAACAAATAAAGAGGTTGCTGATTTGAAAGACTTCTCTAGTCGAAATAATACTCAAATTGAGCTTCCTGCTTTACAAGTACTTGAACTTCATCATATTCTTGTTGGTAGTTATGATGTGATATGTCCATCTTTAAGAACACTATCATTGGATATTGGGAGATATGTTGGGTTTTTCAACATAAATTGTTCAAGCGATGCTTCAGAAGCTACAAAAAGGGATTGTATTGCAATCAAGATATCGAACACAGATTTTGATCCGCCGGTTGAAAGTGTTGAATGTCTTTCAAAACAACCACATGGTTTGAACTTGATTATGACACACAATATTAGAGAGATTGAACTGAAAGGCTTTGATAAGGCAAAGTACCTTTTTAAACTCTCCATTGCTTCATCATTGACGATGTTGGAAATTTTGACAATTAAGAACTGTGGTGGACTTGAGTACATTATAGACACTGATGATGAATATGGCAAAGAGAATATGAAAGCTATCTTTCCCAACTTAAAAGAGCTCTCAGTGTATGAATGTTCCCAATTGAAATATATGTTTGGACAATATGACGTAGCTAATAAGGATTATAAGGAGATTCATATTCAATTCTCAGCATTGGAAAGACTCTGTCTTCGTTTTCTACCAAAGTTTGTTAGCATTTGTTCTACCAACAATCTCATTGTGACGTGGCCATCTTTGAGGTACTTTGAGTGTTACGAATGTTTGTATCCATTTTATGGTTCAAGAGAGCCTATAATCACAAGTACGAAGGATCCGAAAGGGATTCAGAACCATCTCCCCACTTTGCAAACTCTATATATAATGGATTCTGATGCAGAACGTATTTTTTGTCTTAATGAACATGAAATGATTGACCAACAAGTGAATTTAAGTTTAAAGGACTTGGTGTTACGATTTCTACCTCAAATGACTTATATTTGGGTGGGTCCCAACAATTCACTTACTCTCCAACATCTTATCACATTAGAAATATGGAATTGTGGAAAGTTGGAAGTAATCTTTCCAAAGTCTGTTGTAAGATGCTTACCAGAGTTGAAGAACATAATCATAACAAAGTGCATGGAATTGAAGCAGATCATGGAAGAAGACGAGTCAAATCTTCTTCATATAGATGGAGGCTGTGAAGTAGAGGACATTATTGGATGTGATAAAGAAGCTTCAAACAATTATTTTGCCTTCCCAAATCTTGAAGAACTAGAAATATTTGGCTGTGCGAAATTGGAAGTAATCTTTCCAAAGTCTGTTGTAAGATGCTTACCAAAGTTGAAGCTTTTGACGATAAAAGAATGCAAAGAATTAAGACAAATCATTGAAAAGATTATTCTTTCTCCTCAACCATGCTTCCCAAAACTAGAAGCATTGCATGTTGAAGATTGTCACAAGTTGAAAAGATTATTCTCTGGATCTGCTTCTAATGACCTTCCCAATCTTCATCTTCTGGCCATAAATGGAGCCAATGAACTAGAAGAGCTTGTTGGATGTAAACAAGTTAAGATTAAAGTTGAGCTTCCAAGACTCAAACTTTTAATATTTATGCATCTGGAAAACTTCAGTCAAGAATTGCATAATGTAAAGAATTGCATTGTCTACAAATGTCCAAAACTCTCTTTGACTTCAACAACTACATTTGAGAAGCTCCTTGAAGATTTTCCTTATAAAGATTTCATAAACACTGAAGTTGGTAGTTGGATATTTGAAGGCATAGTAAAATCTATTAATGATAGCAGTGAGTCGACTTCATCACAGAAGATTGAGGACGTAGGAAATGAGAGCATTAAATCTTCATCCACTGGAGTTGAAGACATTGGCATTGGAGGTGCTGTTGCAACTCACATTGCCAAGGTAGTTGAACAAGATGATAAACAAGAGGGAATATATGTTGCTCCTAACAACAACAATGACATTTCTTCAGCTTCTGCAGATATCCGTACAAGATTGGGAGCATATAAACATTTTGTTCATCTGGATGATGCACAGATTTCTCTTCTGGTGGAGGCAATAACAACATATCCTCATCTCTGGAATGCTTCCAAGAAGTTTAGTGAGCGCTTTCAAGCTTGGAGGTTGAAAATTTTGGCAGATATGTTGCTGTTCCTTCATAAGGAAAGTGACGATAGTGTTATTCCTCAAAGAGAAAAAGAGTTCGATAAACTATGTGAAGAAGCTATTGAAATTGGATTTGAGAGTTCATGGGTAGAGGAAATGCGTCAACGTGTTGTGGGGAGGGATCCTAAGCTGGAAGAGGACATTGCACAGAGACAAATAGATGAGAATTCTATGAGGTGTATTAGTGGGGACGTTGTTGAAGAAGGTGATGGGCCTAAGATTAGCTTGGAAGAAGGTTCTGACTTGGTTGATAAAGAAGGTGAAATAGGTGTTGTTGCTAATGACCACATTTTGGCTCCGAGAAATGAAGAACCAGAGCAGGAATTTTTTGCAGAAGTTTTCACTTCAGAAATACCAAGAATAGCAACATCATTAACAAACTCGCAAACAGTTGAAACACCCTCAAATAGTATTGAGCAAGTTGCCGTAGAGGAAACCATAGCAAAGAACACCAATATGGCAGCTTCATCAATTTTTTCCGAATCCACGACCTCTAAGTTGGATCCAACAGTTACTTTACTAAGTAAATCACATCCACATCATGAGATTGGGGACGTAAGAAATGATAGTATTAAAGAGGGGCCTGCAGCAGAGGGTGTTGAAGACATTGGCATTGGAGGTGGTGTTGCAACTCACATTGAGTCTGGTGGCGTGGACATACTTGCACAATATTCCAAGGTTGTTGAACAAGATGATAAGATGAATGAAGGAAAGGCAGGAATACTGCCAAGTCCAGATTGCACAGAAGCTGTTGAAATTGGATTTGAGAGTTCATGGGTTGATGAAATGCGTCAACGTGTTGTCATGAGGGATCCTAAGCTGCGAGAGGACATTGCACAGAGACAAATAGAAGAGAATTCTAAGAGGTGTAGTAGTGGGAACATGGTACAAGATTCCCAGGCTGTTGAACGAGCTGATGGGCCTAAGATTAGCTTGGAAGAAGGTGTTGCTTCTAATGACCACATTGGGACCCTGACAAATGAAGAAGCAGAGGAGGAATTTGTTGCAGAAGTTTCCACTTCAGAAATACCAAGAATAGCAACAACATTAACAAGCTCACAACCAGTTGAAAGGTCAACTCCAAGTTGTTTGAATATGCCTCTACGTGAAACACCCCAAAATGCATTGGTGGACAAACAGCGGATTATTGAACCGTCTTTGATGAACCAACAAAATCCATTTGGAGAAATTAGTGAAATTAGGAGCAGCCAAACTGAGGAAGGCATTGGGACCAACGATGTCATAAGCTTATTTGCATCAGAAAAAGAGAGTGAAGATAGCCCAGTGGGAAAGACCCTCGCTGAGCTAGAAAAGTTTATGAAGATGTCTCTGAAGGACGTAATTAGCTCTGAAACTGACACTCTTCGTCTTTGGTCTACTCTTAATTTGCTGTCCAACCTTCCTTTCAAAGATTTGACTCTATCAGATGGACTCAAACGTATTATAGACACTATGCTCCAACACTTCCCAACCATTCTACGCTCTTTTAAGCAAGGCTTTGCTACCACCGACAAGCTGGGAAAGCTTGAAGCTTGTCAGAATGAGGTGGCCACTACTCTTGTTTCCAAAATTTCTGAGGCAGAGAATTTCTACAATGAAGCTCAACTGAAGGAAGTTGTTTTGAAGGAACAAATAAAAGTTTATGAGGCTGCCTTATCATCTTTGGAGAAGGAAAAGAATAAATGCATTGCGGAAACTATAGGATACAAAAAGGAGCTTGAAAATGTGATGAAGGATAGATCTCAAATGTTGGAAGATAAAAGAAAAGTTGAGCAAGAGTTGTTTGACGTCGCTTACAAATGGTCAAATTTGTGTAGTGAATATGAGCTCAATCGCATGGCTGCTACAAATATCCAGTAA 7065 0.374 MECLFGFASSVSRDLVCGALNQLRYPCCSKNFVKRLEEEESNLIITKDSVQKFVTHNKKQARKPSEIVDKWLEDAINDVHNVNQLLEEARTQKHCCFGHCPNWIWRYHVGKKLANKTMHLEKFIKEGREYVPFDRIATLPSNTLDILSEKCMNFESRQSAYEQLLDAVKNNDVSMIGLYGMGGCGKTTLAMEVRKLVEAEHLFDKVLFVPVSSTVEVQRIQEKIASSLPFEFPETEEMQRAQRLCSRLTQEKNIFIILDDVWHNLDFGRIGIPSSEHHKGCKILITSRSEAVCTLMDCQRKIYLPILTDEEAWTLFQNKALITEATSDTLKDLGRLISNECKGLPVAIAAVACSLKGKAETVWRVALNKLRHSKPINIERGLTDPYKCLQLSYDNLDDKEAKSLFLLCSVFPEDSEIIVERLVRCAIGLGVVGEVDSYEEARNEVIAAKIKLVSCCLLLDADDERVKMHDIVRDVAHIIAKDENKMIKCEVEKDVRVEQNSVRYLWCVKFPNDLDCSNLEFLCLRTKMKEFDGIFKRMGMLKVLILVNDEYGRTPLLTISFETLTNLRYLFILNYELSDFSFLGGMKNLQSLSLYNCLLPSFPELQTDVAITLKLLDLNGCNIKVKNFEVIKRIPLLEELYIIEIEGEWDANSVDNIEFFKTFSIPETLQRYGIVLGPFGFEDFDGRDIYIHGRTLLLNHFDISNEVIKGLAKRAKDLFVATIHGGAKNIIPDIFQLEGGGLDELNKLKIRDSEELECLIDTHSHSSEVVTLFSKLHTLGIENMRNLRVIWHCFLPANGPFEKLEKLYLSDCPRLTSLFTYVVARSLIKLKILEISRCDELKYILADDDKTEEGEDEFTTGHPVQIFQNLQDVQINSCRELKHIFPANIVGGLGQLKVLMIEECDKLDQIIGDIVPSTDRDKVIEEGTLSSLTSLMIERCGKLGSIFTASIAKNLTSLEELYIRRCKSLKDIVTHERVNKNQEESIVEDEHDVQSDISIFQSLKNLRIIDCVLLEGIFPVSFVGELNDITNKEVADLKDFSSRNNTQIELPALQVLELHHILVGSYDVICPSLRTLSLDIGRYVGFFNINCSSDASEATKRDCIAIKISNTDFDPPVESVECLSKQPHGLNLIMTHNIREIELKGFDKAKYLFKLSIASSLTMLEILTIKNCGGLEYIIDTDDEYGKENMKAIFPNLKELSVYECSQLKYMFGQYDVANKDYKEIHIQFSALERLCLRFLPKFVSICSTNNLIVTWPSLRYFECYECLYPFYGSREPIITSTKDPKGIQNHLPTLQTLYIMDSDAERIFCLNEHEMIDQQVNLSLKDLVLRFLPQMTYIWVGPNNSLTLQHLITLEIWNCGKLEVIFPKSVVRCLPELKNIIITKCMELKQIMEEDESNLLHIDGGCEVEDIIGCDKEASNNYFAFPNLEELEIFGCAKLEVIFPKSVVRCLPKLKLLTIKECKELRQIIEKIILSPQPCFPKLEALHVEDCHKLKRLFSGSASNDLPNLHLLAINGANELEELVGCKQVKIKVELPRLKLLIFMHLENFSQELHNVKNCIVYKCPKLSLTSTTTFEKLLEDFPYKDFINTEVGSWIFEGIVKSINDSSESTSSQKIEDVGNESIKSSSTGVEDIGIGGAVATHIAKVVEQDDKQEGIYVAPNNNNDISSASADIRTRLGAYKHFVHLDDAQISLLVEAITTYPHLWNASKKFSERFQAWRLKILADMLLFLHKESDDSVIPQREKEFDKLCEEAIEIGFESSWVEEMRQRVVGRDPKLEEDIAQRQIDENSMRCISGDVVEEGDGPKISLEEGSDLVDKEGEIGVVANDHILAPRNEEPEQEFFAEVFTSEIPRIATSLTNSQTVETPSNSIEQVAVEETIAKNTNMAASSIFSESTTSKLDPTVTLLSKSHPHHEIGDVRNDSIKEGPAAEGVEDIGIGGGVATHIESGGVDILAQYSKVVEQDDKMNEGKAGILPSPDCTEAVEIGFESSWVDEMRQRVVMRDPKLREDIAQRQIEENSKRCSSGNMVQDSQAVERADGPKISLEEGVASNDHIGTLTNEEAEEEFVAEVSTSEIPRIATTLTSSQPVERSTPSCLNMPLRETPQNALVDKQRIIEPSLMNQQNPFGEISEIRSSQTEEGIGTNDVISLFASEKESEDSPVGKTLAELEKFMKMSLKDVISSETDTLRLWSTLNLLSNLPFKDLTLSDGLKRIIDTMLQHFPTILRSFKQGFATTDKLGKLEACQNEVATTLVSKISEAENFYNEAQLKEVVLKEQIKVYEAALSSLEKEKNKCIAETIGYKKELENVMKDRSQMLEDKRKVEQELFDVAYKWSNLCSEYELNRMAATNIQ 2354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01891 2354 Gene3D Ribonuclease Inhibitor 857 986 IPR032675 -
Vian10g01891 2354 Gene3D Ribonuclease Inhibitor 697 851 IPR032675 -
Vian10g01891 2354 Gene3D - 142 303 IPR027417 -
Vian10g01891 2354 SUPERFAMILY RNI-like 1283 1523 - -
Vian10g01891 2354 Coils Coil 72 92 - -
Vian10g01891 2354 Coils Coil 2308 2328 - -
Vian10g01891 2354 PRINTS Disease resistance protein signature 825 841 - -
Vian10g01891 2354 PRINTS Disease resistance protein signature 175 190 - -
Vian10g01891 2354 PRINTS Disease resistance protein signature 248 262 - -
Vian10g01891 2354 PRINTS Disease resistance protein signature 341 355 - -
Vian10g01891 2354 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Vian10g01891 2354 Gene3D - 392 478 IPR036388 -
Vian10g01891 2354 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Vian10g01891 2354 Gene3D - 307 391 IPR042197 -
Vian10g01891 2354 Gene3D Ribonuclease Inhibitor 1122 1406 IPR032675 -
Vian10g01891 2354 Gene3D Ribonuclease Inhibitor 1407 1573 IPR032675 -
Vian10g01891 2354 Coils Coil 2351 2354 - -
Vian10g01891 2354 SUPERFAMILY L domain-like 463 1017 - -
Vian10g01891 2354 Gene3D Ribonuclease Inhibitor 494 671 IPR032675 -
Vian10g01891 2354 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 861 1075 - -
Vian10g01891 2354 FunFam Probable disease resistance protein At1g61300 148 301 - -
Vian10g01891 2354 Coils Coil 2273 2300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01891 Vian-Chr10 30879221 30972917 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01891 172 505 WRKY Transcription Factor Family AT5G45050 25.141 2.59e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01891 - - vra:106753628 3131.66