Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01889 ATGATTTCAACTTTGGTTCTCATTCTAGTTTCTGTTCCATCACTGACTTCAGCGTCTCTCAAAGTAGGTTTCTACACCTCCACATGTTCATCTGCGGAGGAAATAGTGAGAAATGCCGTAAACAAAGGAATTTCTGAAAATCCTGGCATAGCTGCTGGTCTCATTAGGATGCATTTCCATGACTGCTTTGTTAGGGGCTGTGAGGGTTCTGTGTTGCTAGCATCTACCCCGGGTAACCCAATAGCGGAAAGAGACCATCTTGCCAACAACCCAAGCTTACGTGGGTTCGAGGTGATCGAGGAGGCCAAGACACAGTTGGAGGCTGCATGTCCTGGAACGGTGTCGTGTGCAGACATATTGGCTTTCGCAGCACGAGACAGTGCTCTTAAAGTTGGCGGCATAAACTACGACGTTCCATCAGGACGCAGAGACGGTCGTGTCTCTATCGCCGACGAAGTGGCACAGAATCTACCTGCACCAACCTCGAGTGCCGCTGAACTCGTGAGTAGATTTGCACAGAAGGGTTTGAGTGCAGACGAAATGGTGACACTTTCAGGAGCTCATTCGATTGGTGTGTCGCACTGTTCCGCCTTCTCGAAGCGCTTGTACTCTTTCAATGACACGTTCACGCAAGATCCCTCCATGGACTCTTCCTACGCTGAAACGTTGAAGACCAAGTGCCCTGCGCCACCTGCTACCTCAGACCCAACACTCTCTCTTGACCCTTCCACTCCGGTTCGTTTGGACATCAAATACTACGAGGGATTGATCAACCACCGTGGCCTGTTGACGTCGGATCAGACGCTGTTCACCACCCAGTCCACAAGAGACATGGTCGTGAACAATGCAAACAACGGTGCAAGCTGGTCTGAGAAGTTTGCCAAGGCAATGGTGCAAATGGGTTCCATAGAAGTGCTCACTGGCTCCAGTGGCGAGATCAGGAAGCATTGCAGCTTTGTTAATTAA 966 0.5021 MISTLVLILVSVPSLTSASLKVGFYTSTCSSAEEIVRNAVNKGISENPGIAAGLIRMHFHDCFVRGCEGSVLLASTPGNPIAERDHLANNPSLRGFEVIEEAKTQLEAACPGTVSCADILAFAARDSALKVGGINYDVPSGRRDGRVSIADEVAQNLPAPTSSAAELVSRFAQKGLSADEMVTLSGAHSIGVSHCSAFSKRLYSFNDTFTQDPSMDSSYAETLKTKCPAPPATSDPTLSLDPSTPVRLDIKYYEGLINHRGLLTSDQTLFTTQSTRDMVVNNANNGASWSEKFAKAMVQMGSIEVLTGSSGEIRKHCSFVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01889 321 Gene3D - 23 321 - -
Vian10g01889 321 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PANTHER PEROXIDASE 25-RELATED 10 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Vian10g01889 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Vian10g01889 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 FunFam Peroxidase 158 300 - -
Vian10g01889 321 CDD secretory_peroxidase 20 320 IPR033905 GO:0004601|GO:0042744
Vian10g01889 321 FunFam Peroxidase 23 168 - -
Vian10g01889 321 Gene3D Peroxidase, domain 2 158 300 - -
Vian10g01889 321 Pfam Peroxidase 36 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01889 321 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01889 Vian-Chr10 30857167 30858228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01889 7 321 Peroxidase AT1G05260 47.484 1.72e-96 286