Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01874 ATGGAAGAAATCAGAGAGTTATATCGTTGCTTGGAGAAAGGCTACAATTCTTATCCATTACATCTTCCTGGAACTTCCTATTGGAAAGCAATGAAGGCAAGGAAGCATTTGAATGAGAGCATAAGAAGAATAATTGAGAGAAGAAAAGTGGAGAGTTCAAAGTATGGAGGAGGACTATTGGGAGTTTTATTGCAAGCAAGATCTTCACCATCGAGATCAAGATCAACATCTTCAAGATCTTCATCATGTGGTGAGGAGAAGAAGGTGTTCATGGAACTGAGTGATTCTCAAGTAGCAGATAATCTGATTGGTGTGCTATTTGCTGCACATGACACCACAGCAAGTGCCCTAACATGGGTCCTCAAGTACCTTCATGACAACTCCAATCTGTTGGAAGCTGTGACGAGAGAACAAGAAGGAATAAGAAGCAAACTAGCTATGGAAAATCGTGGACTTTCGTGGGATGATACCAGGCAAATGCCATTCACAAATCGGGTGATTCAAGAAACATTGAGAAGTGCAAGCATTTTGTCATTCACATTCAGAGAAGCAGTGACAGATGTGGAGTTGGAAGGTTACACAATTCCGAAAGGTTGGAAGGTCCTTCCACTCTTCAGAAGCATTCATCATTCTGCTCACTTCTTCCCTCACCCAGAGAAGTTCGACCCTTCAAGATTCGAGGTACCACCGAGACCAAACACATACATGCCTTTTGGAAATGGTGTCCATTCTTGTCCAGGCAGTGAGCTGGCCAAGCTAGAACTTCTTGTCCTTCTCCATCATCTCACACTTTCTTACAGGTGGGAAGTTGTGGGGAAAGAGGATGGAATACAATACGGTCCATTTCCTGTGCCAAAACATGGATTACCGGTGAAGATAATACCAAGGAGAAAGATATTTACGTGA 906 0.4283 MEEIRELYRCLEKGYNSYPLHLPGTSYWKAMKARKHLNESIRRIIERRKVESSKYGGGLLGVLLQARSSPSRSRSTSSRSSSCGEEKKVFMELSDSQVADNLIGVLFAAHDTTASALTWVLKYLHDNSNLLEAVTREQEGIRSKLAMENRGLSWDDTRQMPFTNRVIQETLRSASILSFTFREAVTDVELEGYTIPKGWKVLPLFRSIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSELAKLELLVLLHHLTLSYRWEVVGKEDGIQYGPFPVPKHGLPVKIIPRRKIFT 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01874 301 PANTHER CYTOCHROME P450 26 2 285 - -
Vian10g01874 301 PRINTS B-class P450 signature 165 176 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS B-class P450 signature 182 209 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS B-class P450 signature 245 256 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS B-class P450 signature 236 245 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS B-class P450 signature 210 225 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS P450 superfamily signature 108 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS P450 superfamily signature 236 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS P450 superfamily signature 245 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 PRINTS P450 superfamily signature 165 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 Gene3D Cytochrome P450 1 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 238 247 IPR017972 GO:0005506|GO:0016705
Vian10g01874 301 Pfam Cytochrome P450 23 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01874 301 SUPERFAMILY Cytochrome P450 3 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01874 Vian-Chr10 30728722 30735213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01874 2 290 Cytochrome P450 AT3G19270 54.671 7.40e-111 327