Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01867 ATGAAGGAGTTGGTGACCAACATCATGAAAGAGGTTGGAAGGCCAAATTTGGCTGATTGTTTCCCAGTGCTGAAGATGATCGACCCTCATGGAATCAGAAGACGCACAGGAAGCTACTTTTCGAAGCTTTTGAACATATTCAAGAGCTTGATTCACAAAAGGTTGGAACTGAGAAAAGATGCTGCTGGTTACTGCACCAAAAAGGACATGTTGGATGCCATGCTCAACGATGCTCAACATAAGATGGACATAGTTAAGATTCAACGTTTGTCATTGGATTTGTTTGTGGCAGGAACTGATACAGTGACATCTACGGTAGAATGGGCAATGGCTGAGTTACTTCACAACCCACATGTTATGTCAAAGGCAAAAGAAGAGTTAGAGAGGATTATAGGAAAAGATAACCTTGTGGAAGAGTCAGACATAGCGAAACTCCCTTATTTGCAGGCAATAGTGAAAGAGACTTTCAGGTTGCACCCTGCAGTTCCACTTTTGCTACCCAGAAAAGCTGAAGTGGAATTTGAGATGCATGGATACACAATTCCAAAGGGTGCACAAGTGTTGATTAATGTGTGGGCCATAGGAAGGGACCCTAATTTGTGGGAGAAACCTAGATTGTTTTGGCCTGAGAGGTTTTTGGAATCAGAAATAGACTTCAAAGGAAGGAGTTTTGAGCTTACCCCATTTGGTGGTGGGAGGAGAATATGCCCTGGTTTGCCATTGGCCATAAGGTTGGTGTTCTTGATGTTGGGATTGTTCATCAATTCCTTTGATTGGGAGCTTCAGGATATTCAACCAGAGGATATGAACATGGATGAAAACTTTGGACTCACCTTGGAGAAGGCTCAACCTGTTTTAGCTATTCCAATCATTCCAAAACATTAG 885 0.4249 MKELVTNIMKEVGRPNLADCFPVLKMIDPHGIRRRTGSYFSKLLNIFKSLIHKRLELRKDAAGYCTKKDMLDAMLNDAQHKMDIVKIQRLSLDLFVAGTDTVTSTVEWAMAELLHNPHVMSKAKEELERIIGKDNLVEESDIAKLPYLQAIVKETFRLHPAVPLLLPRKAEVEFEMHGYTIPKGAQVLINVWAIGRDPNLWEKPRLFWPERFLESEIDFKGRSFELTPFGGGRRICPGLPLAIRLVFLMLGLFINSFDWELQDIQPEDMNMDENFGLTLEKAQPVLAIPIIPKH 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01867 294 Gene3D Cytochrome P450 1 287 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 106 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 149 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 226 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 190 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 236 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS E-class P450 group I signature 86 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 290 - -
Vian10g01867 294 PRINTS P450 superfamily signature 236 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS P450 superfamily signature 227 236 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS P450 superfamily signature 97 114 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 PRINTS P450 superfamily signature 150 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 FunFam Geraniol 8-hydroxylase 40 288 - -
Vian10g01867 294 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 229 238 IPR017972 GO:0005506|GO:0016705
Vian10g01867 294 SUPERFAMILY Cytochrome P450 3 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01867 294 Pfam Cytochrome P450 3 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01867 Vian-Chr10 30636609 30638272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01867 2 290 Cytochrome P450 AT2G45550 48.986 2.33e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01867 - - lja:Lj2g3v0039250.1 447.973