Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01864 ATGGGTTGTAACTCGAAAGAGAGTGAAATTCCCTTGGAAGTGGAAAAGGTGGATGATGCATACCGTTCTGCTGTGTTGCTGTGTTTCAGCAGAGTCCTCCCTGCAATTCTAAACGCTGCTATAGACATAAATCTGTTTGATGTCATAGCAAAGGCAAAGAGTTCTTCCGATGACTCAAGTTTTTCTGCTTCTGAGATTGCTTCTTTGCTTCCAAATCAGCTCCCACAATTGGCTAATAGGCTTGAAAGAATGCTGCCACTCTTGGTCAGTTACTCTCTTTTACGTTGCTCTATTCGCACCGATCAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCACACCAGTTGGACAGTACTTTGCTTATGATCATCAAGGAATCTCTCTCGCTCCACTCTCAACCTTACTTCATCGCGGATTTCATGACCTTTGGAAGGATGCAAAAGGAGCATTTCTAGACCCTAATTGCAGTAACCATTTTGAAAGTGTCTTTGGAATGCTGTCATATCAGTATATGGAGAAAGATGCAGAGTTGAATCAAATGTTCTACAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAGAGTACTCAAAGTATATAAAGGATTTGAGGGATTGTCAACACTGGTTGATGTAGGAGGTGGAGTAGGAGAGACCCTGAAACTTATTCTCTCTGCATACCCTTCAATCAAAGGAATTAACTTTGATTTACCTCAGATGATTCAAGATGCACCTCCTCATCCAGGTGTGGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAGTGGGGATGCCATTTTAGTGAAGTCTATATGTCACAACTGGGGAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCACCAAATGGGAAAGTGATTGTTTTGGACTATATAATTCCAGAGGTTCCCAATTCAAGTGATGCATCTAAACATAGTACTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTGAGACTGAATTTGAGAACCTGTGCAAGAGCTCTGGCTTTTTCAAGTTTCGTGTTGCATGTAATGACATATCAGCTACTGTGGGAGTGATGGAGTTCTACAAGTAG 1110 0.4117 MGCNSKESEIPLEVEKVDDAYRSAVLLCFSRVLPAILNAAIDINLFDVIAKAKSSSDDSSFSASEIASLLPNQLPQLANRLERMLPLLVSYSLLRCSIRTDQDGKRERVYALTPVGQYFAYDHQGISLAPLSTLLHRGFHDLWKDAKGAFLDPNCSNHFESVFGMLSYQYMEKDAELNQMFYKAMAHAGPIEVKRVLKVYKGFEGLSTLVDVGGGVGETLKLILSAYPSIKGINFDLPQMIQDAPPHPGVEHVGGDMFESVPSGDAILVKSICHNWGDEDCIKFLRNCHKALPPNGKVIVLDYIIPEVPNSSDASKHSTIVDNHMLLAHGGRERTETEFENLCKSSGFFKFRVACNDISATVGVMEFYK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01864 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Vian10g01864 369 Gene3D - 3 119 IPR036388 -
Vian10g01864 369 PIRSF O-mtase 3 369 IPR016461 GO:0008168
Vian10g01864 369 Gene3D Vaccinia Virus protein VP39 123 369 IPR029063 -
Vian10g01864 369 FunFam Uncharacterized protein 120 369 - -
Vian10g01864 369 FunFam Caffeic acid 3-O-methyltransferase 3 119 - -
Vian10g01864 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 122 IPR036390 -
Vian10g01864 369 CDD AdoMet_MTases 208 305 - -
Vian10g01864 369 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Vian10g01864 369 Pfam O-methyltransferase domain 143 348 IPR001077 GO:0008171
Vian10g01864 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 356 IPR029063 -
Vian10g01864 369 PANTHER O-METHYLTRANSFERASE 29 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01864 Vian-Chr10 30592099 30594619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01864 1 369 Monolignol Biosynthesis Gene Families AT5G54160 44.624 3.43e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01864 - - gmx:106794104 547.74