Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01856 ATGAACTTTATTCTCACAGCCGATCCCACGAACGTGCACCACATCACCACCAAGAACTTTAGCAACTACGGGAAAGGGTCCAATTTCAGTGAAATATTTGACGTTTTTGGAGGTGGGATTATTAATTCTGATAATCTCCATGCATGGAAAAAAGAAAGGTCAGTACTTCATTCACTGTTTCAAAGGCAAAGCCTTAAGATCTTCCTTCGAAAAGCCATTCAGAAGAAGCTAGAGAATGACCTAGTTCCATTTCTTGATGATACATCCGAGGTTGGAGCTGAGGTAGACTTACAATTTGCCCTTCGGAGGTTCACATTCGACATTGCCTGCTCTTGTTTTCTTGGTTATGATCCTCACTCTCTTCCAAACAAGAATACTAAGCTTTCTCAACCTACTTATCAGAGAGCTTTAGTTGTGATCGAGGAGTCATTATTTCACAGGCACATCACACCGAGATGTTTGTGGAAGTTGCAGGAGTGGCTCCAGATTGGTCAAGAGAAGAAGTTCAAGGAGGCCAGAGAAATTTTTGATAAATTCTTGTATGAATGCGTTGCAGCCAAGCGTGAAGAGAAAAATAGATGCAATAGCACCAAAGAAGTAGATGATACTGATCATGACTTGCTGGGAGTGCTAATGGAAGAAGGAGATCAAAAGGGGAGAATAATGGATGACAAGTATCTTAGAGACACTGCATTTACCTTTGTCTCTGCTGGAAGTGGCACAATCAGTGCAAGTCTCAGTTGGTTCTTTTGGCTGGTTTCAACTCATCCACATGTGGAAGCTAAAATCCTTGAAGAGATCAAAGAAAATTGCATGAACCAAGATGGAACTTGGATTGCTTCTGGTGTTGAAGAGTTTGGTAAGTTAGCTTATCTCCATGGAGCTATATGTGAAGCACTGAGGCTTTTTCCTACTGTGCCCTATGATCACAAGTGTGCAATAAAATCTGATAGACTTCCTAGTGGACACCATGTTAGTCCAAATACCATGATATTATACTCTTTGTATGCAATGGGAAGAATGGAAGAAATATGGGGACATGATTGCATGGAGTTTAAGCCTGAGAGATGGATTTCAGAGAGTGGAGAGATTATACAAATTCCAGCTCACAAGTTCATAGCTTTCAATGCAGGCCCTAGAAATTGTTTGGGTAAAGACATTACTTTCACTGAAATGAAGATGGTTGCAGTTGCTATACTGTGGAGGTTTCAGATGAAGGTGGTGGATGGTCATCCTATAACACCAAGAGTCTCTGTGGTGCTTACCATTGAACAAGGTTTGAAGGTTAAGGTTACTAAGAGATGCACTTGA 1311 0.4104 MNFILTADPTNVHHITTKNFSNYGKGSNFSEIFDVFGGGIINSDNLHAWKKERSVLHSLFQRQSLKIFLRKAIQKKLENDLVPFLDDTSEVGAEVDLQFALRRFTFDIACSCFLGYDPHSLPNKNTKLSQPTYQRALVVIEESLFHRHITPRCLWKLQEWLQIGQEKKFKEAREIFDKFLYECVAAKREEKNRCNSTKEVDDTDHDLLGVLMEEGDQKGRIMDDKYLRDTAFTFVSAGSGTISASLSWFFWLVSTHPHVEAKILEEIKENCMNQDGTWIASGVEEFGKLAYLHGAICEALRLFPTVPYDHKCAIKSDRLPSGHHVSPNTMILYSLYAMGRMEEIWGHDCMEFKPERWISESGEIIQIPAHKFIAFNAGPRNCLGKDITFTEMKMVAVAILWRFQMKVVDGHPITPRVSVVLTIEQGLKVKVTKRCT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01856 436 CDD CYP86A 1 427 - -
Vian10g01856 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Vian10g01856 436 Gene3D Cytochrome P450 1 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 Pfam Cytochrome P450 9 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PANTHER CYTOCHROME P450 4 428 - -
Vian10g01856 436 SUPERFAMILY Cytochrome P450 2 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01856 436 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01856 Vian-Chr10 30456829 30458139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01856 1 434 Cytochrome P450 AT2G23180 43.991 1.45e-133 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01856 - - vra:106753569 836.254