Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01850 ATGGAGATGGAGAGGTACACCAGTCAGCGGTGGCGACCTACTGACGATCAGGTCAGAATGATGACCAATATTTACAATTACGGGGTCACACATCCCAGCAGAGCGCAAGTCGTCGAAATTGCGTCTCGACTAAGGGTTTTCGCAGATGTCACTGAATACAATGTGCACTGCTGGTTTAACAACCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCTACTGGCACTCAGTTTTCACAACTGCCGCTATACATGTATGAAAACGACTGGGTGATCATGAGGGCGCCGAGGCTGCTGAACTTGTTCCCCGTTCCGATCATCATTGACGACGACAGGGACGGACGACAAATCGCTCCACCCATGCATCTCACATTCCGGACCAGAGCTCCCTCGACGGAGCTCTCCCTCAGACCACCGCAACCAACCCGGGAATTTTTTCGCTGA 450 0.5333 MEMERYTSQRWRPTDDQVRMMTNIYNYGVTHPSRAQVVEIASRLRVFADVTEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYENDWVIMRAPRLLNLFPVPIIIDDDRDGRQIAPPMHLTFRTRAPSTELSLRPPQPTREFFR 149
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01850 149 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 68 IPR044555 GO:0003700|GO:0099402
Vian10g01850 149 CDD homeodomain 10 70 IPR001356 GO:0003677
Vian10g01850 149 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
Vian10g01850 149 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian10g01850 149 Pfam Homeodomain 8 68 IPR001356 GO:0003677
Vian10g01850 149 Gene3D - 2 74 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian10g01850 Vian-Chr10 30383528 30384111 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01850 7 72 Wox Gene Family AT5G59340 39.394 1.47e-12 61.2
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian10g01850 Homeodomain 2.8e-09 CL0123