Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01836 ATGGATCTTCAGATCTTTGATATGTTAGCTCCTATTTCCCTTTTCTTCCTGATGCTGGTGGCACTGAAATTGGGGAGGAATCTCACCAAAACCAAGCCAACTCCAAAGACACCTCCAGGACCATGGAAGCTACCTATCATAGGAAATATACCCCATCTTGTTACACCAACACCACACATAAAACTAAGAGACTTAGCCAAAAACTATGGACCCTTGATGCATCTCCAACTGGGAGAGGTCTTCACTGTAGTTGTTTCCTCAGCAGAATGTGCCAAAGAGGTAATGAAAACTCATGATCTTCTCTTTGCATCAAGGCCTCTGATTCTAGCCTCAAAGATAATCGGTTATGATGCCACAAACATATCTTTTTCCCCTTATGGAAATTATTGGAGACAGTTGAGGAAAATTTGCACAGCTGAGCTTTTCACTCCAAAACGTCTCAATTCTTTCAAGCCTATAAGAGAAGAAGAGCTCTCAAGTCTCATCAAAATGATTGCTTCAGAAAATGGCTCACCATTCAATCTCTCTGAGGCACTTCTCACATCCAACTATGCTATAATTTCGAGGGCAGCTTTTGGCAAGACGTGCAAAGAGCAAGAAGAATATATATCAGTGGAAAAGGAAGTGCTTAAGGCTGCAGGAGGATTTGATATTGGAGATTTGTTTCCTTCAGCCACATGGCTCCAAAATTTTACTGGTTTGAGGCCTACCCTTGAGAGATTGCACCGAAAAAGTGATCAAATACTTGAAAACATCATGAGGGAGCACAAAGATAGAAAGTCAAAATCCAAAGAAGGTCTGGTTGAAGCAGAAGAGGACCTTGTAGATGTCCTTCTAAAATTTCAGGATGATAGTGGTGAAGATCAGGATATTTGCTTGACTGATGACAACATCAAGGCTATAATTGATAATATCTTTGCTGCTGGAGGTGAGACATCGGCAACTACCATAGATTGGACAATGGCAGAGATGATAAGGAATCCAAGGGTGATGAAGAGAGCACAGGCCGAAGTGAGAGAGGTATTCAAGATGAATGGAAGGGTTGATGAAACTTGCATCAATGAAATGAAATATTTGAAGTTAGTTATCAAAGAGACCTTGAGGTTACACCCACCAGCACCTCTTTTACTTCCAAGAGAATGTGGACAAACATGTGAGATTGATGGGTATCATATACCAGTCAAAAGCAGGGTAATTGTGAATGTTTGGGCAATTGGAAGAGATCCAAACAGTTGGAGTGAGCCAGAGAGGTTTTATCCTGAGAGATTCAGTGATAGCTCTGTTGACTACAAAGGGAATAATTTTGAGTTCATTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGTATCACATTTGGTTTGATGAATGTTGAACTCACACTTGCACTTTTGTTATATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGCTGAGGAAATGGACATGACTGAGCAATTTGCACTAACTGTTAGAAGAAAAGATTATCTGTTTTTGATTCCCTCCATTGCAACACGATGCTCATAA 1527 0.406 MDLQIFDMLAPISLFFLMLVALKLGRNLTKTKPTPKTPPGPWKLPIIGNIPHLVTPTPHIKLRDLAKNYGPLMHLQLGEVFTVVVSSAECAKEVMKTHDLLFASRPLILASKIIGYDATNISFSPYGNYWRQLRKICTAELFTPKRLNSFKPIREEELSSLIKMIASENGSPFNLSEALLTSNYAIISRAAFGKTCKEQEEYISVEKEVLKAAGGFDIGDLFPSATWLQNFTGLRPTLERLHRKSDQILENIMREHKDRKSKSKEGLVEAEEDLVDVLLKFQDDSGEDQDICLTDDNIKAIIDNIFAAGGETSATTIDWTMAEMIRNPRVMKRAQAEVREVFKMNGRVDETCINEMKYLKLVIKETLRLHPPAPLLLPRECGQTCEIDGYHIPVKSRVIVNVWAIGRDPNSWSEPERFYPERFSDSSVDYKGNNFEFIPFGAGRRICPGITFGLMNVELTLALLLYHFDWKLPNGMKAEEMDMTEQFALTVRRKDYLFLIPSIATRCS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01836 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vian10g01836 508 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PANTHER OS08G0105600 PROTEIN 61 502 - -
Vian10g01836 508 FunFam Cytochrome P450 71D8 30 501 - -
Vian10g01836 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01836 508 Coils Coil 253 273 - -
Vian10g01836 508 CDD CYP71-like 69 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01836 Vian-Chr10 30140117 30141764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01836 12 502 Cytochrome P450 AT3G26300 43.200 1.21e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01836 - - gmx:100801936 733.021