Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01834 ATGGATTATGAGTTAGCTAAGATATTATCCTTTACCATGCCCTTTATTCTCTTCATGATTTTGGCACTCAAAATAGGGACCAGTCTCAAGAAAACTGGGTCATCTCAAAAAATACCACCAGGACCATGGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCATCTGCACCACACAGAAAATTAAGAGACTTAGCCAAAATATATGGTCCTTTGATGCATCTCCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAATATGCCGAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTACAATTCTAGCTTCTGATATATTGTGCTATGAATCCACTGATATTGTGTTTTCTCCTTATGGAAACTACTGGAGACAGCTACGAAAAATCTGCACAGTAGAACTTTTCACCCAGAAACGTGTCAACTCATTCAGACCAATAAGAGAAACTGAGTTCACCAATCTCGTTAAAATGATTGATTCTCATCAGGGGTCATCCATCAACCTCACTGAAGCAGTTCTTTCATCGATATACAACATCATTTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAAGAGTTCATATCAGTGGTAAAAGAAGGAGCACTAGCTGTATCAGGTTTGAGCATTGGAGATTTGTTTCCTTCTGCCAAATGGCTTCAACTTGTTACTGGTTTGAAGCCTAAGCTTGAGAAGCTGCATCGACAAATTGATCGGATTCTGGGAGACATCATCAATGAACACCAACAGACAAATCCAAAAGCCCCAGAAGGCCAGGGTGAAGCAGACGAAGATTTGGTAGATGTTCTCCTAAAATTCCAGGATGGTAATGAGAGAAACCATGATATTTGCTTAACTATTAACAATGTCAAGGCTATAATCCTGGATATCTTTTCTGCTGGAGGAGACACAGCAGCTTCTACCATTAATTGGGCAATAGCAGAGATGATAAGGGATCCGAGAGTAATGAAGAAAGCACAATATGAGGTGAGAGAGGTATTCAATATGAAAGGATTGATTGATGAAACATGCATGGATGAACTCAAATACTTGAAATCAGTGGTCAAAGAGACCTTAAGGTTACATCCACCAGCTCCTCTTTTACTTCCAAGAGAATGCAGAGAAGCATGTGAGATTAAAGGGTATCATATTCCAGCTAAAAGCAAGGTAATTGTGAATGCTTGGGCAATTGGAAGAGATCCAAACTATTGGAGTGAAGCAGAGAGGTTTTATCCAGAGAGATTCATTGATAGCTCTATTGATTACAAAGGGAGTAGTTTTGAGTACCTTCCATTTGGTGCTGGAAGAAGAATATGCCCAGGTATCACATTTGGTTTGATAAATATTGAAGTGGCACTTGCATATTTGTTGTATCACTTTGATTGGAAGCTTCCGAATGAAATGAAAAGTGGGGACTTGGACATGACTGAGGAATTTGGAGTGACTGTTAGAAGAAAAAATGACATATGCTTGATACCAGTCACTTATAGCCATGCAAGAAAGTTATGA 1536 0.3958 MDYELAKILSFTMPFILFMILALKIGTSLKKTGSSQKIPPGPWKLPVIGNIHNLLSSAPHRKLRDLAKIYGPLMHLQLGEVFTIIVSSPEYAEEIMKTHDLIFASRPTILASDILCYESTDIVFSPYGNYWRQLRKICTVELFTQKRVNSFRPIRETEFTNLVKMIDSHQGSSINLTEAVLSSIYNIISRAAFGMKCKDQEEFISVVKEGALAVSGLSIGDLFPSAKWLQLVTGLKPKLEKLHRQIDRILGDIINEHQQTNPKAPEGQGEADEDLVDVLLKFQDGNERNHDICLTINNVKAIILDIFSAGGDTAASTINWAIAEMIRDPRVMKKAQYEVREVFNMKGLIDETCMDELKYLKSVVKETLRLHPPAPLLLPRECREACEIKGYHIPAKSKVIVNAWAIGRDPNYWSEAERFYPERFIDSSIDYKGSSFEYLPFGAGRRICPGITFGLINIEVALAYLLYHFDWKLPNEMKSGDLDMTEEFGVTVRRKNDICLIPVTYSHARKL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01834 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vian10g01834 511 FunFam Cytochrome P450 71D8 31 502 - -
Vian10g01834 511 CDD CYP71-like 70 497 - -
Vian10g01834 511 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 PANTHER OS08G0105600 PROTEIN 62 505 - -
Vian10g01834 511 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 SUPERFAMILY Cytochrome P450 39 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vian10g01834 511 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01834 Vian-Chr10 30128371 30130340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01834 16 505 Cytochrome P450 AT3G26300 41.851 4.06e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01834 - - gmx:102665189 842.802