LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian10g01829	ATGGGAACACAAAAATCTAATATGTTTGATACAGCTTACAATTATTTGGTGCCTGAAGATGAAATTCTTGACAAGCCAACACACTGGACTCCTATGCAGGCATATAACAATTCTGCGTCTACTCCGATTCCCTTTTTATATCAACACGCAGCTGGTTACATGCCTCTCTACATGTGGCCAAACCAGGCAAACAGCACAGTACTTCAATCTAATGTTTTGCAGGATCCAATGAAGCTCTCCAATAAACCTACAGTATCTGAGGATGCTGTACTGGCCTTTTCAGAAATAGTACACAGGACTTTTGGCGAGCAAAACCTAAATTCAATAAAAAAATGTGCTAGAAACTTACAACCTAAAAGTTTAATACCTAAGGAATCAAGAGGAGATCGAAGCAAATCTTCGATACTGAAAAACAAGGATAGAGTGTTGTGCAGTGAAGCATATGGAAACAAGGGATCACTACATGAAGACCTTGTCACTGCTAATGATTTTCCTTCAACTAAGAAGCAAGACTGTAATTTGATGCTTGAAAATGCAAGTTCAATCCAACTGAATCAGGATTTGGAGACGGGCCTAGATGCAATTGGCACTAACACTGAACTAGTGAAGTTGGAAGAGGATGAAATAAGAAGAGAAAGAAAAAGACAGTCGAATAGAGAATCTGCTAGGAGATCAAGGATGCGGAAAGAGAGAGAATGTGAAGAGTTACAAAAGAAAATGGAAATTCTTAAGGATGAAAACTCCATGCTCACACAAAGGCTCAAGAGTCTTTCTGAGGAATGTCTGGAAATCTGCAATGAAAATGATGCCATAGAGGAAGAGCTGGTTAACATGTATGGAACAGAATCAATATCATATCTGTTGGACATGAAGCCACGCTGA	882	0.3912	MGTQKSNMFDTAYNYLVPEDEILDKPTHWTPMQAYNNSASTPIPFLYQHAAGYMPLYMWPNQANSTVLQSNVLQDPMKLSNKPTVSEDAVLAFSEIVHRTFGEQNLNSIKKCARNLQPKSLIPKESRGDRSKSSILKNKDRVLCSEAYGNKGSLHEDLVTANDFPSTKKQDCNLMLENASSIQLNQDLETGLDAIGTNTELVKLEEDEIRRERKRQSNRESARRSRMRKERECEELQKKMEILKDENSMLTQRLKSLSEECLEICNENDAIEEELVNMYGTESISYLLDMKPR	293

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian10g01829	293	CDD	bZIP_plant_GBF1	211	261	IPR045314	GO:0003700\|GO:0006355
	Vian10g01829	293	SMART	brlzneu	206	270	IPR004827	GO:0003700\|GO:0006355
	Vian10g01829	293	Pfam	bZIP transcription factor	206	263	IPR004827	GO:0003700\|GO:0006355
	Vian10g01829	293	MobiDBLite	consensus disorder prediction	212	231	-	-
	Vian10g01829	293	Coils	Coil	219	274	-	-
	Vian10g01829	293	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	213	228	IPR004827	GO:0003700\|GO:0006355
	Vian10g01829	293	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	25	280	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Vian10g01829	293	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	208	260	IPR004827	GO:0003700\|GO:0006355
	Vian10g01829	293	SUPERFAMILY	Leucine zipper domain	209	264	IPR046347	GO:0003700\|GO:0006355
	Vian10g01829	293	Gene3D	-	199	269	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vian10g01829	32	287	bZIP Transcription Factor Family	AT4G36730	30.037	1.54e-23	96.3

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Vian10g01829		bZIP_1	2.3e-15	CL0018

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian10g01829	K09060		-	gmx:102665715	431.795