Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01814 ATGGAGAGGTGTTCGAAGACCAAGGAAATGTTAAAAATGCTACGGAGAATAGCAACCTTGACAAAGGGAATAACAACATTCAAGCAAATGCAGTCAGGGACATTTTTTGTCTCCAACCCTGACGTTTACGGCGGCTCAGAAAGGCACACCTTGGGCCATCCAAGGGGGTCAGATATGGCTCACCATTGTTCAAACAAGGCCCTTCTTTTCATTTTTCTTTCTCTTTTTTCAACCTTTTCAAGTGCTCATCTTCTTCCTGAAATCATCCACGTTGAGCCAATTTATTCAACTAATGTTGAAGATGACGCACTACTAGCCCCAGCCCCAGCACCCGAAATAGAATTCCGAAACGATGAACCCCTTACTCCACCACCAACCAGAAAAACAAATGAAAGACTGAAGAAGGCCTATGTTGCTTTTCAGGCATGGAAGAAGGCCATTCACTCCGACCCTTTGAACATCACCGGGAACTGGGTTGGTGAAGATGTTTGCTCTTACAATGGTGTGTATTGTGCTCCTGCCCTTGATGATCCCACCCTGAATGTGGTTGCTGGCATTGATCTGAACAATGCAGACATTGCTGGGAGCCTCCCAGAAGAATTGGGACACTTGGAAGATATTGCACTTTTCCACATTAACTCCAACAGATTCTGCGGTGTTATCCCAGACAGCTTGCTGAATCTTACACTTGTGCATGAGTATGACATCAGCAACAATCGCTTTGTTGGTCGGTTTCCTTCTGTGGTCCTCACATGGCCGAACTTGAAGTACCTGGACCTCAGATTCAATGACTTTGAAGGACCCTTACCCCCAGAGCTTTTTGAGAAGGATCTTGATGCAATCTTTTTGAACAACAACCGTTTCTCATCCCTCATTCCAGACACCATAGGAAAATCCAACGCCTCGGTCATCACCTTTGCCTACAACAATTTCAAAGGCTGCATTCCGAGCTCTTTCGGAAACATGAAGAACTTGAACGAGATTGTGTTCGTAGGAAACAGCCTCGGAGGATGCTTCCCACAGGATGTTGGAAAGATGGAAAACCTGACGGTTTTGGATTTAAGCGACAATGGGTTTGAAGGGACTCTTCCTAACTTGTCAGGACTGAAGAAGGTCGAGGTGATAGACATTTCGCACAACAAGCTCAGTGGATATGTGTCTAACACTGTGTGCCAACTTCCTTCCTTGAAGAACTTCACATTCTCTCACAACTACTTCAATGGAGAAGCTCAGAGTTGCGTGCCTTCACCCAATTCGTTGGTGGCTATGGATGACTCATACAACTGTTTGTCTGGAAGGAAGGATCAGAAGTCATCCAAGAAGTGCTTGCCAGTGCTAACTCGCCCTGTGGATTGCAACAAGCACTGTGGAGAAGGCAAAGAGAATGGCCATAGCCCTAGCCATAGCCATAGCCATGCACCAAAGCCAACTCCATCTCCTAAACCTGAGACACCAAAGGTTGTACACTCTTCACCACCTGTACATTCACCACCACCACCACCAGTTCATTCTCCACCACCTCCCGTACACTCCCCACCACCTCCTCCAGTTCACTCTCCTCCACCTCCCGTTTCCTCACCACCTCCACCGGTACACTCCCCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCAGTTCACTCCCCACCACCTCCTCCCGTCTCCTCTCCACCTCCACCAGTTCACTCCCCACCACCTCCTCCCGTCTCCTCTCCACCTCCACCGGTACACTCCCCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCAGTTCACTCCCCACCACCTCCTCCCGTCTCCTCTCCACCTCCACCGGTACACTCCTCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCGGTTCACTCCCCACCACCTCCTCCCGTCTCCTCTCCACCTCCACCGGTACACTCCCCACCACCTCCTCCTGTCTCCTCTCCACCTCCACCGGTACACTCCCCACCACCTCCTCTCGTCTCCTCTCCACCTCCACCGGTACACTCCCCTCCACCTCCTCCTGTTCACTCCCCACCACCTCCCGTTTTCTCACCACCTCCTCCTCCCGTCTCCTCTCCACCTCCACCAGTACACTCCCCACCACCACCTCCTGTTTTCTCACCACCTCCTCCAGTTCACTCCCCACCACCACCACCAGTCAACTCTCCACCTCCACCAGTTTATTCCCCACCACCACCAACACCAATTTCCTCCCCTCCACCACCAGTTGCCTCCCCACCACCACCAGTTCACTCTCCTCCTCCACCAGTTTCCTCCCCACCACCACCAGTGTACTCTCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCTCTACCACCACCACCAGTGTACTCCCCACCACCACCAGTGTACTCCCCTCCTCCACCAGTTTTCTCTCCCCCACCACCAGTTTCCTCTCCACCACCACCACCACCACCTGTGTACTCTCCACCACCGCCAGTGCACTCTCCTCCTCCACCAGTTTCCTCCCCACCACCACCAACACCAGTGTACTCACCACCACCACCAGTGTACTCCCCACCACCAGTTTACTCTCCTCCTCCTCCAGTCTCTTCACCACCACCACCACCAGTGTATTCCCCACCACCATCAAAATGGGACGATGTTTTCCTTCCACCACACTATGGCTCCTCATACAGTTCACCTCCTCCACCAACAATTGCTGGATACAACTAA 2709 0.5234 MERCSKTKEMLKMLRRIATLTKGITTFKQMQSGTFFVSNPDVYGGSERHTLGHPRGSDMAHHCSNKALLFIFLSLFSTFSSAHLLPEIIHVEPIYSTNVEDDALLAPAPAPEIEFRNDEPLTPPPTRKTNERLKKAYVAFQAWKKAIHSDPLNITGNWVGEDVCSYNGVYCAPALDDPTLNVVAGIDLNNADIAGSLPEELGHLEDIALFHINSNRFCGVIPDSLLNLTLVHEYDISNNRFVGRFPSVVLTWPNLKYLDLRFNDFEGPLPPELFEKDLDAIFLNNNRFSSLIPDTIGKSNASVITFAYNNFKGCIPSSFGNMKNLNEIVFVGNSLGGCFPQDVGKMENLTVLDLSDNGFEGTLPNLSGLKKVEVIDISHNKLSGYVSNTVCQLPSLKNFTFSHNYFNGEAQSCVPSPNSLVAMDDSYNCLSGRKDQKSSKKCLPVLTRPVDCNKHCGEGKENGHSPSHSHSHAPKPTPSPKPETPKVVHSSPPVHSPPPPPVHSPPPPVHSPPPPPVHSPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSSPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPPVSSPPPPVHSPPPPLVSSPPPPVHSPPPPPVHSPPPPVFSPPPPPVSSPPPPVHSPPPPPVFSPPPPVHSPPPPPVNSPPPPVYSPPPPTPISSPPPPVASPPPPVHSPPPPVSSPPPPVYSPPPPVFSPPPPVSSPPLPPPPVYSPPPPVYSPPPPVFSPPPPVSSPPPPPPPVYSPPPPVHSPPPPVSSPPPPTPVYSPPPPVYSPPPVYSPPPPVSSPPPPPVYSPPPSKWDDVFLPPHYGSSYSSPPPPTIAGYN 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01814 902 Gene3D Ribonuclease Inhibitor 134 300 IPR032675 -
Vian10g01814 902 FunFam Leucine-rich repeat extensin-like protein 1 137 297 - -
Vian10g01814 902 SUPERFAMILY L domain-like 141 432 - -
Vian10g01814 902 Gene3D Ribonuclease Inhibitor 301 447 IPR032675 -
Vian10g01814 902 MobiDBLite consensus disorder prediction 802 843 - -
Vian10g01814 902 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 298 386 - -
Vian10g01814 902 MobiDBLite consensus disorder prediction 473 783 - -
Vian10g01814 902 MobiDBLite consensus disorder prediction 881 902 - -
Vian10g01814 902 PRINTS Proline rich extensin signature 505 517 - -
Vian10g01814 902 PRINTS Proline rich extensin signature 466 478 - -
Vian10g01814 902 PRINTS Proline rich extensin signature 518 539 - -
Vian10g01814 902 PRINTS Proline rich extensin signature 485 501 - -
Vian10g01814 902 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 84 596 - -
Vian10g01814 902 ProSiteProfiles Leucine-rich repeat profile. 348 370 IPR001611 GO:0005515
Vian10g01814 902 MobiDBLite consensus disorder prediction 855 874 - -
Vian10g01814 902 MobiDBLite consensus disorder prediction 457 783 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01814 Vian-Chr10 29971225 29974985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01814 48 455 Trihelix Transcription Factor Family AT3G19020 58.637 5.32e-170 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01814 - - gsj:114419228 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g01814 10 29971225 29974985 Vian10g01814 10 29971225 29974985 ECH