Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01786 ATGGATATTATCACTCGCCGCTTCCTTCCAATCATTTCAACTTTGCTTCTCATTCTAGTTTCTCTTTCTTCATTGGCCTCAGCGTCTCTCAAAGTGGCGTTCTACGCCTCCACGTGTCCATCTGCGGAGGAAATAGTGACAAGTACTGTAAACAAAGCCATTTCAGAAAACTCAGGCATAGCAGCTGGTCTCATAAGGATGCATTTCCACGACTGCTTTGTCAGGGGCTGCGATGCTTCCGTGTTGCTAGCATCTACCCATGGTAACCCAGCAGAAAGAGACCATTTTGCCAACAACCCAAGCTTGCGTGGGTTCGAGGTCATTGAGGACGCCAAGGCCCAGTTGGAGGCTGCATGTCCTCAAACGGTGTCGTGCGCAGACATATTGGCCTTGGCAGCAAGAGACAGTGCTCTTAAAGTGGGTGGCATAAACTACGACGTTCCAACAGGACGCAGAGACGGTCTTGTCTCCGTGGCCGATGAAGCGGCGGAGAATCTGCCTGCACCAACCCTGAGCGCCGATGAGCTTGTGAGTAGGTTTTCACGAAAGGGTTTGTCTGCAGATGAAATGGTGACACTTTCAGGAGCCCATTCCATTGGTGTGTCGCATTGTTCTTCCTTCTCTAAGCGGTTGTACTCTTTCAATGAGACCTTGCCGCAAGACCCATCAATGGACTCTTCCTACGCTGAAACCTTGAAAACAAAGTGTCCTGCGCCACCTTCCATCTCAGACCCAACCGTGTCTTTTGATCCTTCCACTCCCATTCGTTTGGACACCAAATACTACGATGGATTGATCGACCACCGAGGCTTGCTCACATCGGATCAGACGCTGTTCACCTCTCAATCCACCAGGGAAATGTTCCGGGTAGTGTTGGCATTTTTGTTGCGGCATTTATCATATAGGAAATTGTTTTTGAAATATTCCAATGGGGTTGAGAAATGTGCAAGGACGGCTTGTGAAGAGGTAGCTGTTGCAGCTGAGGCACCTGCTTCCATTCCCGGTGAGCCCATGGACATCATGACTGCTTTACAGCTTGTGCTGAGAAAATCTCTGGCTTACGGTGGTCTTGCAAGAGGTCTTCATGAAGGTGCCAAGATCATTGAGAAGCATGCTGCACAGCTCTGTGTTCTAGCAGAAGACTGTGACCAACCTGATTATGTGAAACTGGTGAAGGCCCTTTGCGCCGAGCACAATGTTAGCCTTTTGACAGTTCCAAGTGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGTAAGATTGACTCAGAGGGAAAGGCTAGGAAGGTAACTGGTTGCTCATGTGTGGTTGTTAAGGACTTTGGGGAGGAACATGAAGCCTATAATGTTGTTCTGCAGCACTTTTTCTACTTTGGTCTAAATGTTGTTGGGCTGGACTATTTTGGTCTTGATGACTGTCAGGATGGTCTAGTCTGTTTGGATGATTCTCGGGGTGCCAAACTCATGATTAGCCCTAGCTTTCTACATGCTCCACTTAGCTCGGTGAAGGATGTGGAAAGCTCGATGAACCATGTGGAAAACTCAATGAAGCATGACGTTAGGATGGGTTCAAGTGTTGATAACTCTTTTGGTTGTGGATGTGAGAAAAAGATTCTCTTTGGCTTAGGATGCAGGAAAAGGATGGGTTTGAGTGTTGATAATTCTGTGGATATGGGAAAGAGATTCTCTTCGGCCGTGGATGCGAAAAAGAGATTCTCTTTGATCATGGATGCGGGAAAGATATTCTCTTCGTTCGGGGAAGAGGATAAGGTTGGTGTTGGATGGCAGGACGACTCGAACTGGTTGGTTCTGATGAACAGGTGGTATGGTAGGATACGGGAGATAGACCCCTGA 1851 0.4797 MDIITRRFLPIISTLLLILVSLSSLASASLKVAFYASTCPSAEEIVTSTVNKAISENSGIAAGLIRMHFHDCFVRGCDASVLLASTHGNPAERDHFANNPSLRGFEVIEDAKAQLEAACPQTVSCADILALAARDSALKVGGINYDVPTGRRDGLVSVADEAAENLPAPTLSADELVSRFSRKGLSADEMVTLSGAHSIGVSHCSSFSKRLYSFNETLPQDPSMDSSYAETLKTKCPAPPSISDPTVSFDPSTPIRLDTKYYDGLIDHRGLLTSDQTLFTSQSTREMFRVVLAFLLRHLSYRKLFLKYSNGVEKCARTACEEVAVAAEAPASIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKIIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHFFYFGLNVVGLDYFGLDDCQDGLVCLDDSRGAKLMISPSFLHAPLSSVKDVESSMNHVENSMKHDVRMGSSVDNSFGCGCEKKILFGLGCRKRMGLSVDNSVDMGKRFSSAVDAKKRFSLIMDAGKIFSSFGEEDKVGVGWQDDSNWLVLMNRWYGRIREIDP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01786 616 Gene3D - 322 455 IPR029064 -
Vian10g01786 616 Gene3D - 33 166 - -
Vian10g01786 616 FunFam 40S ribosomal protein S12 324 455 - -
Vian10g01786 616 ProSitePatterns Ribosomal protein S12e signature. 343 361 IPR000530 GO:0003735|GO:0005840|GO:0006412
Vian10g01786 616 Gene3D Peroxidase, domain 2 167 289 - -
Vian10g01786 616 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 FunFam Peroxidase 33 175 - -
Vian10g01786 616 FunFam Peroxidase 167 305 - -
Vian10g01786 616 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 343 436 IPR004038 -
Vian10g01786 616 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vian10g01786 616 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vian10g01786 616 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 SUPERFAMILY Heme-dependent peroxidases 30 290 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 SUPERFAMILY L30e-like 337 453 IPR029064 -
Vian10g01786 616 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 PANTHER PEROXIDASE 25-RELATED 20 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01786 616 CDD secretory_peroxidase 31 287 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01786 Vian-Chr10 29666731 29674959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01786 19 317 Peroxidase AT3G21770 45.364 1.05e-79 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01786 K00430 - gmx:100815350 457.218