Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01782 ATGGATATTATCACTCGCCGCTTCCTTCCAATCATTTCAACTTTGCTTCTCATTCTAGTTTCTCTTTCTTCATTGGCCTCAGCGTCTCTCAAAGTGGCGTTCTACGCCTCCACGTGTCCATCTGCGGAGGAAATAGTGACAAGTACTGTAAACAAAGCCATTTCAGAAAACTCAGGCATAGCAGCTGGTCTCATAAGGATGCATTTCCACGACTGCTTTGTCAGGGGCTGCGATGCTTCCGTGTTGCTAGCATCTACCCATGGTAACCCAGCAGAAAGAGACCATTTTGCCAACAACCCAAGCTTGCGTGGGTTCGAGGTCATTGAGGACGCCAAGGCCCAGTTGGAGGCTGCATGTCCTCAAACGGTGTCGTGCGCAGACATATTGGCCTTGGCAGCAAGAGACAGTGCTCTTAAAGTGGGTGGCATAAACTACGACGTTCCAACAGGACGCAGAGACGGTCTTGTCTCCGTGGCCGATGAAGCGGCGGAGAATCTGCCTGCACCAACCCTGAGCGCCGATGAGCTTGTGAGTAGGTTTTCACGAAAGGGTTTGTCTGCAGATGAAATGGTGACACTTTCAGGAGCCCATTCCATTGGTGTGTCGCATTGTTCTTCCTTCTCTAAGCGGTTGTACTCTTTCAATGAGACCTTGCCGCAAGACCCATCAATGGACTCTTCCTACGCTGAAACCTTGAAAACAAAGTGTCCTGCGCCACCTTCCATCTCAGACCCAACCGTGTCTTTTGATCCTTCCACTCCCATTCGTTTGGACACCAAATACTACGATGGATTGATCGACCACCGAGGCTTGCTCACATCGGATCAGACGCTGTTCACCTCTCAATCCACCAGGGAAATGGGTTTTCATGGTGGATGTAGAGATTCGGATGGTTAG 897 0.5017 MDIITRRFLPIISTLLLILVSLSSLASASLKVAFYASTCPSAEEIVTSTVNKAISENSGIAAGLIRMHFHDCFVRGCDASVLLASTHGNPAERDHFANNPSLRGFEVIEDAKAQLEAACPQTVSCADILALAARDSALKVGGINYDVPTGRRDGLVSVADEAAENLPAPTLSADELVSRFSRKGLSADEMVTLSGAHSIGVSHCSSFSKRLYSFNETLPQDPSMDSSYAETLKTKCPAPPSISDPTVSFDPSTPIRLDTKYYDGLIDHRGLLTSDQTLFTSQSTREMGFHGGCRDSDG 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01782 298 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 FunFam Peroxidase 33 175 - -
Vian10g01782 298 Pfam Peroxidase 47 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PANTHER PEROXIDASE 25-RELATED 20 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 ProSiteProfiles Plant heme peroxidase family profile. 29 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vian10g01782 298 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vian10g01782 298 Gene3D - 33 166 - -
Vian10g01782 298 FunFam Peroxidase 167 290 - -
Vian10g01782 298 SUPERFAMILY Heme-dependent peroxidases 30 286 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 CDD secretory_peroxidase 31 287 IPR033905 GO:0004601|GO:0042744
Vian10g01782 298 Gene3D Peroxidase, domain 2 167 287 - -
Vian10g01782 298 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vian10g01782 298 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01782 Vian-Chr10 29620213 29623347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01782 8 284 Peroxidase AT1G05260 48.571 4.36e-83 251