Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01775 ATGGGTTTTGTTTCGTGGCTTGCTGTGTTGTTGTTGTTCTGTGTGGGGTTTGAGTGTGCGTGGTGTCAAGATGATACTGTGATGAACAAATTGAAGAAGGCCATCAATGAACCCAGTGGTCTGCAATGGAATGACCCAGATGTGTGTAAATGGAAACACGTTAAGTGCAGCGCCATGAAGAGGGTTACTGCAATTCAAATTGGGGGACAGAGTTTGCAAGGTTCTCTGCCTAAGGAACTGGCGCAGCTCTCAGAGTTGACACGATTTGAGTGCATGAGCAATGACTTCACTGGGCCATTTCCTAACATGCCAAAGTCCCTTGAGGTTCTGCTCATCCACAAAAACAATTTCCAGTCCCTACCGGGTGATTTCTTCACCGGCATGACCAATTTACAGAATGTCAGCATTGGCTACAACCCTTTTTCCCAGTGGGGGATTCCTGATGGCCTCAAGGACTGTGTGGCTCTCAGGAGTTTCTCTGCAACCAGTGCCGGTTTGGTGGGGAAAATCCCAGATTTTTTTGGTAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTATCTTGAGTTTTAATTCTCTTGAAGGAGGATTGCCTGCAACCTTTTCTGGGAGTTCTTTGGAGACACTTTGGGTGAATGGTCAGAAAAGTGATGGTAAACTCAATGGTACCCTTGATGTGTTAAAGAGCATGACATATTTGAAACAAATTTGGGTGCACGGTAACTCGTTCACAGGTCCTATACCGGACTTCTCGAATCATGATCAGCTATATGATGTGAGCTTGAGGGACAACCAGTTAACTGGGGTTGTTCCACTCTCTCTCACCGCTCTCCCTGCTCTTAAAGTGGTGAATTTGACCAATAACTTACTTCAAGGCTCTCCTCCCTTGTTCAAAGATGGAGTGAAGGTTGATAATGATTTAGACAAGGGGATCAATAGTTTTTGCACAGTGGAGGCTGGTAAGCCATGCAGTCCTGTAGTGGATGCTTTACTTTCTGTTGTTGAACCTTTTGGATACCCTCTGAGACTGGCTGAAAGTTGGAAGGGGAATGTCCCTTGTGGTCAAAACTGGTTGGGGATTGTTTGCTCAAATGGTAACGTTTCCGTCATCAACTTGCAGAGCATGAATCTCTCTGGCAACATTTCTCCCAGTTTTGCTTCGCTTACATCTGTGACAAAGCTGCTTCTTCCCAACAATGGCCTCACTGGTACCATACCAAGTGAACTCACCAGCATGCCTGGTCTGGTAGAATTGGATGTTTCGAATAATCAATTGCACGGCAAGGTGCCATCTTTTCGTGAGGGTGTAGTTGTTAAAACCGGTGGGAATCCTGATATTGGAAAGGATAAGCCTCAAGGCCCGCCTGGCTCAAATCCTCAGGGTAAATCTGGTGGTCAGGTTAAGAAAAATAATACTGGAGCAATTATTGGCACTGTGTTGGGAGGTATCAGTTTAATTGGTTTGGGGGCTTTGATATTTCTTATGTATGGTAGAAAACGTAAGCAAGCAGGCAAAGTTCAAGGTCCTAGTGCAATAGTGGTACATCCTCGTTATTCTGGGGATGGAAATAATCTAAAGATAAGTGTAGCAGATGCTAGTGCTGGTGTTAGTGTTGGTGGTAGTGGTGTAGGAGGAATTGGTGTACTTAGTCCAGCTAGTACTGCTCAACATGTGGAAGCTGGGAATATGGTTATTTCAATCCAAGTTTTGAGACAAGTTACGAACAATTTCAGTGAGGCAAACATATTGGGGAAAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATGTGGAATGATGGTTGAGAAGGGGCTCACTGAGTTTGAGTCTGAAATTGCAGTACTGACTAAGACCTCATTTGAAACCAGGCTTGCTGGAACTTTTGGATATTTGGCTCCAGAGTATGCAGTCACTGGACGAGTTACAACAAAGGTTGATGTTTACAGCTATGGAGTGATTCTGATGGAGATGATAACAGGAAGAAAAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTTGTTACATGGTTCAGGAGGATGCTACTGAACAAAGACTCTTTTGAAAAGATTATTGACCCCATAATGTGTATTGATGAGGAGGCCCTACCCAGCTGTAGGACTGTGGCTGAGTTGGCTGGCCACTGTTGTGCAAGGGAGCCTTACCAGCGTCCAGACATGAGCCATGTGGTGAATGTCTTGGCACCTCTTGTTGAGATTTGGAAGCCTTCTGAGACAGATGATGAAGACATTTATGGAATTGACTTAGACATGACCTTGCCTCAAGCACTCAGAAAATGGCAGGCTGTTGAAGGAAGGAACACCTTTGATACTTCTTCATCAATGCTTACCAGTGAAGAAAATACACAATCTAGCATTCCAACAAGGCCATTTGGATTTGCTAATTCTTTTAATTCCTCTGATGGAAGATGA 2472 0.4438 MGFVSWLAVLLLFCVGFECAWCQDDTVMNKLKKAINEPSGLQWNDPDVCKWKHVKCSAMKRVTAIQIGGQSLQGSLPKELAQLSELTRFECMSNDFTGPFPNMPKSLEVLLIHKNNFQSLPGDFFTGMTNLQNVSIGYNPFSQWGIPDGLKDCVALRSFSATSAGLVGKIPDFFGKDGPFPGLVSLILSFNSLEGGLPATFSGSSLETLWVNGQKSDGKLNGTLDVLKSMTYLKQIWVHGNSFTGPIPDFSNHDQLYDVSLRDNQLTGVVPLSLTALPALKVVNLTNNLLQGSPPLFKDGVKVDNDLDKGINSFCTVEAGKPCSPVVDALLSVVEPFGYPLRLAESWKGNVPCGQNWLGIVCSNGNVSVINLQSMNLSGNISPSFASLTSVTKLLLPNNGLTGTIPSELTSMPGLVELDVSNNQLHGKVPSFREGVVVKTGGNPDIGKDKPQGPPGSNPQGKSGGQVKKNNTGAIIGTVLGGISLIGLGALIFLMYGRKRKQAGKVQGPSAIVVHPRYSGDGNNLKISVADASAGVSVGGSGVGGIGVLSPASTAQHVEAGNMVISIQVLRQVTNNFSEANILGKGGFGTVYKGELYDGTKIAVKRMECGMMVEKGLTEFESEIAVLTKTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMITGRKAIDNSQPEENVHLVTWFRRMLLNKDSFEKIIDPIMCIDEEALPSCRTVAELAGHCCAREPYQRPDMSHVVNVLAPLVEIWKPSETDDEDIYGIDLDMTLPQALRKWQAVEGRNTFDTSSSMLTSEENTQSSIPTRPFGFANSFNSSDGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01775 823 FunFam Leucine-rich repeat receptor-like kinase 325 449 - -
Vian10g01775 823 Gene3D Transferase(Phosphotransferase) domain 1 631 755 - -
Vian10g01775 823 FunFam Receptor-like kinase TMK4 22 320 - -
Vian10g01775 823 Gene3D Ribonuclease Inhibitor 22 321 IPR032675 -
Vian10g01775 823 ProSitePatterns Protein kinases ATP-binding region signature. 583 605 IPR017441 GO:0005524
Vian10g01775 823 Pfam Protein kinase domain 633 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g01775 823 Gene3D Ribonuclease Inhibitor 326 450 IPR032675 -
Vian10g01775 823 MobiDBLite consensus disorder prediction 791 823 - -
Vian10g01775 823 MobiDBLite consensus disorder prediction 433 468 - -
Vian10g01775 823 PANTHER OSJNBA0070M12.3 PROTEIN 9 629 - -
Vian10g01775 823 Pfam Leucine rich repeat N-terminal domain 27 57 IPR013210 -
Vian10g01775 823 Pfam Leucine rich repeat N-terminal domain 328 363 IPR013210 -
Vian10g01775 823 Gene3D Phosphorylase Kinase; domain 1 555 630 - -
Vian10g01775 823 SUPERFAMILY Protein kinase-like (PK-like) 567 757 IPR011009 -
Vian10g01775 823 SUPERFAMILY L domain-like 30 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01775 Vian-Chr10 29509841 29513725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01775 56 760 Receptor kinase-like Gene Family AT1G73080 25.373 2.68e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Vian10g01775 Pkinase 3.6e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01775 - K00924 gmx:100776064 988.023