Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01726 ATGGAGATTGAGAGGTACACTGGTCAGCGGTGGAGACCTACTGACGATCAGGTCAAAATGATGACCCACATCTACAATTACGGGGTCACACATCCTAGCAGAGCCCAAGTCGTTGAGATTGCATCTCGACTAAGGGCTTTCGGAGAAGCCAGTGAATACAATGTGCACTGCTGGTTTAACAACCACGGCAATCGGGTCAGGCGCTGGCAAGCGGAGATAGACCCTACTGGCACTCAGTTTTCACAACTGCCGCTATACATGTATGAATATGACTGGGTGATCATGAGGGCGCCGAGGCTGCTGGACTTGTTCCCCGTTCCGATCATCATTGACGACGATAGGGACGAACGACAAATCCCTCCACCCATGCTTCTCACATTCCGGACCAGAGCTCCCTCGACGGAGCTCTCCCTCAGACCATCGTAA 426 0.5258 MEIERYTGQRWRPTDDQVKMMTHIYNYGVTHPSRAQVVEIASRLRAFGEASEYNVHCWFNNHGNRVRRWQAEIDPTGTQFSQLPLYMYEYDWVIMRAPRLLDLFPVPIIIDDDRDERQIPPPMLLTFRTRAPSTELSLRPS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01726 141 Gene3D - 8 73 - -
Vian10g01726 141 PANTHER WUSCHEL-RELATED HOMEOBOX 13 9 72 IPR044559 GO:0003700
Vian10g01726 141 SUPERFAMILY Homeodomain-like 9 70 IPR009057 -
Vian10g01726 141 ProSiteProfiles 'Homeobox' domain profile. 4 69 IPR001356 GO:0003677
Vian10g01726 141 Pfam Homeodomain 9 68 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01726 Vian-Chr10 28833067 28833600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01726 7 72 Wox Gene Family AT5G59340 39.394 3.95e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vian10g01726 Homeodomain 5.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01726 - K06662 vum:124821070 261.536