Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01723 ATGGAGTATGAGGAACGGCAGTATCCTCTTTCTCCTCTGCAACTTCTTCTGAGGGACTCTAAACTTCGTAACACAGACTATATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTAATTCAGAATTCCACTGATGCCCCTTCAAAGAGAACAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGTATTGTGTTTCTAATGGCGTTTGTTGGATCTATTTTCTTTGGCATTGCAACTAGAGATGACTTGGACAATGGAGTGATGAAAAGGTGGTACCTAAGACCAGATGACTCTACAATTTTCTTTGATCCTCAAAGAGCACCAGCTGCTGCTATATTACATTGTTTCACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTTCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGATTCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCGATGGAGTTCATCAAATGTTCCATTGCTGGGGTGGCGTATGGCCGTGGTGTTACAGAGGTTGAGAAGGCTATGGATAGAAAGAATGGTTTTCCTTTGATTGACGATTCAAGGGACTCGCCTGTCAGAAATGCTCCCATCAAAGGATTTAACTTTACAGATGAAAGGATAATGAATGGAAATTGGTTTAACGAGCCTAATGCAAATGTTATTAAGAATTTTTTTCACTTATTGGCAATTTGCCATACAGCCCTACCTGAAGTTGATGAAGATACAGGAAATGTCTCATATGAAACTGAATCTCCAGATGAATCAGCATTTGTGATTGCAGCAAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATCTATGAATCGGATCCAGTTTCTGGTGACAAAATTGAACGGACATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATTGTGGAAGATGAAGAAGGGAGAATTTTGTTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTACATGAGTATGCTGATGCAGGTCTAAGGACTCTAATTCTGGCATATCGTGAACTTGATGAAAACCAATACAATGAGTTTAACAATAAATTTTCTGAAGCAAAAAATTCAGTTAGTGAAGATCGGGAAACACTGATTGAGGAAATATCAGATAAGATCGAAAGGAATCTAATCCTTCTTGGGGCCACTGCTGTAGAGGACAAGCTCCAAAAAGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTTCTTGTAGTTTACTTAGACAAGGAATGAAACAAATTATAATTCAATTGGAAACTCCAGAAATTAAAGCATTGGAGAAGGCTGGAGACAAGGTGGCTATTGCTAAGGCTTGTCGAGAAAATATCCGCCATCAAATATCTGAAGCTTCTCAGCAGCTGACTGCCTCCAGAGGAACTTCTCAGCAAGCATTTGCTTTAATTATTGACGGAAAATCACTTTCTTATGCACTAGAGGATAATATGAAGAGCATGTTTTTGGACCTTGCAATTCGTTGTGCATCAGTTATCTGCTGCCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTAAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGTGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATCGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGGTTGCTTCTTGTTCATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGCTACTTCTTCTACAAAAACATCACATTTGGGTTTACTCTATTCTTATATGAGGTGTATGCATCGTTCTCTGGGCAACCGGCATACAATGACTGGTTTTTGTCAGTCTATAATGTATTCTTTTCGTCACTTCCTGTGATTGCTCTTGGAGTCTTTGACCAGGATGTGTCTGCTCGGTATTGTCTGAGGTTTCCTATATTATATCAAGAAGGCGTGCAAAATCTTCTCTTTAGCTGGCGGAGAATTTTCAGCTGGATGCTAAATGGCTTTATAAGTGCCATAATAATTTTCTTTTTCTGCACAAAAGCAATGGAAATTCAAGCCTTTGATGAACAGGGAAGAACTGCTGGCAGGGATATACTCGGAGCAACAATGTACACCTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTGCTATAAATTACTTCACCTTGATTCAACACATTTTCATCTGGGGTTCCATTGCTCTCTGGTACCTTTTCCTCCTGGCATATGGTGCAATGTCTCCCAGCATTTCAGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCATCGCCCTCCTTCTGGATTGTGACATTGGTTGTCGTGATCTCAACACTCATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCACGAAATGGTACAATGGATAAGGCATGAGGGAAAGACAAATGATCCTGAATTCGTCGCTATGGTGCGGCAAAGATCACTGCGGCCAACAACTGTCGGTTCAACGGCTCGCTTGGTGGCTAAGGATAATGACTTCAAAGACAGTTCAACTAACCATAGATAG 2853 0.4038 MEYEERQYPLSPLQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDAPSKRTKVEKKMDRVIYFMFCIVFLMAFVGSIFFGIATRDDLDNGVMKRWYLRPDDSTIFFDPQRAPAAAILHCFTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDSDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMDRKNGFPLIDDSRDSPVRNAPIKGFNFTDERIMNGNWFNEPNANVIKNFFHLLAICHTALPEVDEDTGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSIYESDPVSGDKIERTYKLLNVLEFNSSRKRMSVIVEDEEGRILLLCKGADSVMFERLAKDGREFEEKTLEHVHEYADAGLRTLILAYRELDENQYNEFNNKFSEAKNSVSEDRETLIEEISDKIERNLILLGATAVEDKLQKGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFSCSLLRQGMKQIIIQLETPEIKALEKAGDKVAIAKACRENIRHQISEASQQLTASRGTSQQAFALIIDGKSLSYALEDNMKSMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNVFFSSLPVIALGVFDQDVSARYCLRFPILYQEGVQNLLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEQGRTAGRDILGATMYTCVVWVVNLQMAVAINYFTLIQHIFIWGSIALWYLFLLAYGAMSPSISGNAYKVFIETLAPSPSFWIVTLVVVISTLIPYFSYSAIQMRFFPMYHEMVQWIRHEGKTNDPEFVAMVRQRSLRPTTVGSTARLVAKDNDFKDSSTNHR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01723 950 PRINTS P-type cation-transporting ATPase superfamily signature 184 198 - -
Vian10g01723 950 PRINTS P-type cation-transporting ATPase superfamily signature 617 636 - -
Vian10g01723 950 FunFam Phospholipid-transporting ATPase 452 657 - -
Vian10g01723 950 SUPERFAMILY HAD-like 172 661 IPR036412 -
Vian10g01723 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 895 IPR023298 -
Vian10g01723 950 Gene3D - 299 452 IPR023299 GO:0000166
Vian10g01723 950 SFLD C1.7: P-type atpase like 166 668 - -
Vian10g01723 950 NCBIfam phospholipid-translocating P-type ATPase 3 902 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vian10g01723 950 SFLD p-type atpase 166 668 IPR044492 -
Vian10g01723 950 Gene3D - 453 657 IPR023214 -
Vian10g01723 950 NCBIfam HAD-IC family P-type ATPase 588 699 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vian10g01723 950 Pfam Cation transport ATPase (P-type) 284 378 - -
Vian10g01723 950 FunFam Phospholipid-transporting ATPase 294 452 - -
Vian10g01723 950 Pfam Phospholipid-translocating P-type ATPase C-terminal 645 895 IPR032630 -
Vian10g01723 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 186 192 IPR018303 -
Vian10g01723 950 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 251 453 IPR023299 GO:0000166
Vian10g01723 950 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 906 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01723 Vian-Chr10 28689743 28695503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01723 1 945 Primary Pumps ATPases AT1G68710 72.477 0.0 1503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01723 K01530 - gmx:100785037 1765.74