Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01710 ATGGTTGCGGTTGTTTGTGTTGTTGCTGAACTCACTGTAACTGCTCGTTCAGGGAGGAGGCTCGAAACTGGGAATTGTTCAATGGGAAAAGAGATTTCTGATTCTGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGGAAAGACTGTGATCGCCATGAAATTGCTCCAATCCAAGACCAACTATCCTTTGAGAAGGGTTTTTTCATTGTAATTCGTGCATGCCAATTGTTAGCACAAAAGAATGATGGAATAGTATTGGTAGGGGTGGCAGGTCCTTCCGGAGCAGGCAAGACTGTATTTACTGAAAAGATACTGAACTTCATGCCCAGCATTGCTGTCATTTCAATGGATAATTACAATGATTCCAGTCGAATTGTTGACGGCAACTTTGATGATCCACGCTTAACAGACTACGACACGTTACTTCAGAATTTACATGATTTAAAGGAAGGAAAGCCTGTTCAAGTTCCCATATATGATTTCAAGTCCAGTTCACGAACAGGATACAGGACAGTAGAAGCTCCAACTTCTCATATCGTGTTTATAGAGGGCATCTATGCCTTGAGTGAAAAGTTACGACCTCTACTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATTCAACGCGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAAACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCAACTTACATATTAAAGTCAGCAAAGAATCTCGCAGTGGATCAAATTAAAGCTGTTCTGTCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAGACTTGCCAATCATATTTGCGAATGCGAAATAAGGATGGGAAATACAGCCTCATGTTTGAGGAATGGGTGACTGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTTAGTGTGCGCCTTCTCGGTGGACTAATGGCCTTGGGGTACACAATAGCCACTATCCTTAAGAGAAACAGCCATGTTTTCTCTGATGATAGGGTTTGTGTGAAACTGGATTGGCTTGAGCAACTCAATAGACATTATGTTCAGGTACAAGGAAGAGATCGCTTGGTTTTACAATACATAGGACAGCAGCTAGGTCTAGATGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAAATTGAAAAGCTTGTGGACGAGGTTATGGCCCTACCAGAGGATTTGAAGACAAAACTCAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGAATATCACAGTCATATACCAATCAAAGAGACAAAAACCTTGCTAAGGTTACTGGATATGATTCCAACAATAGAAGGTTTGGTGAAAGAAATTCAGAGTCCAGCACAATGTCAGTGAATCAGGGAGCAATCAATCAACTTTCGGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAATTAAACACCAAGAGAAATTCTCCAAGCCAACAGAATATGTCACTTCAAACTGAGACATGCAATGGATCAGCTCCCACCTCATACTTCATCACTAGTTTGGGCAATGGTTCCCTAACTGGATCTAAAATGGCAAATTCCTCTTCATCATCACAGTTAAATAAGGATTCTCCTTTAATGGAAGAGATATCAAGCATTGCACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGTAGCTCAGGGGAGAAGTCTCAACAAACAAGAACTAACCGGAGAAGCATGGATACGACAGCAGATTCCATGGGAACCTCTGTTATGGCAGTGGTGGCAGTTGGTTGTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAACCGTAATTGA 2073 0.412 MVAVVCVVAELTVTARSGRRLETGNCSMGKEISDSDSHHKRLGLLKDQVHLVKRKDCDRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVQVPIYDFKSSSRTGYRTVEAPTSHIVFIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAKNLAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLQYIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPEDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVTGYDSNNRRFGERNSESSTMSVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLNTKRNSPSQQNMSLQTETCNGSAPTSYFITSLGNGSLTGSKMANSSSSSQLNKDSPLMEEISSIARSQRQIMHQLDNLNNLLRGSSGEKSQQTRTNRRSMDTTADSMGTSVMAVVAVGCLGIFLMKGLLNRN 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01710 690 CDD UMPK_like 94 266 - -
Vian10g01710 690 MobiDBLite consensus disorder prediction 558 578 - -
Vian10g01710 690 MobiDBLite consensus disorder prediction 639 662 - -
Vian10g01710 690 ProSiteProfiles CYTH domain profile. 275 437 IPR023577 -
Vian10g01710 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 263 IPR027417 -
Vian10g01710 690 Pfam Phosphoribulokinase / Uridine kinase family 95 263 IPR006083 GO:0005524|GO:0016301
Vian10g01710 690 MobiDBLite consensus disorder prediction 556 578 - -
Vian10g01710 690 MobiDBLite consensus disorder prediction 505 525 - -
Vian10g01710 690 SUPERFAMILY CYTH-like phosphatases 294 434 IPR033469 -
Vian10g01710 690 PRINTS Uridine kinase signature 251 264 - -
Vian10g01710 690 PRINTS Uridine kinase signature 215 225 - -
Vian10g01710 690 PRINTS Uridine kinase signature 159 174 - -
Vian10g01710 690 PRINTS Uridine kinase signature 92 109 - -
Vian10g01710 690 Pfam CYTH domain 280 431 IPR023577 -
Vian10g01710 690 Gene3D - 93 294 IPR027417 -
Vian10g01710 690 PANTHER URIDINE KINASE 45 450 - -
Vian10g01710 690 Coils Coil 530 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01710 Vian-Chr10 28503931 28514800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01710 94 263 PRT Gene Family AT5G40870 28.177 7.13e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01710 K00876 - gmx:100797542 1185.63