Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01667 ATGGCAATGGCATTAGCGTCACTCCCTTCCCCTTTCCTCTTCCTTCTCACCTCTATTTTCATGTTGCTTTACCTCTCCCTCCTCACTCACTCCATAAACCCCGACTTCCACCCTCTAATGTCGTTCAAAGCCGCTTCCGACCCTTCCAACAATCTCGCCCAGTGGAACTCCACAACCTCAGACCCCTGCACTTGGTACGGTGTCTCTTGTCTCCGTAACCGTGTCTCTCGCCTCGTCCTTCAAGACCTAAACCTCACAGGCTCCATCCACCCCCTAACCTCTCTCACCCAACTTCGTATCCTCAGCCTAAAACGCAACCGTTTGAACGGCCCCATCACCTCTCTCGCCAACCTCACCGCGCTCCGCCTTCTCTTCCTCTCCCACAACAACTTCTCCGGCCCCTTCCCCGCCACGCTCACCTCTCTCTACCGCCTTGATCTCTCACACAACAGTCTCTCCGGCGAAATCCCCCCCACTTTCAATCGCTGGACCCACCTCCTCACCCTCCGCCTCGACTCCAACCGTTTCCGCGGCCGCATTCCCAGCAACATCAACCTCTCTCGTCTTCAAGACTTTAACGTCTCAAACAACCTCCTGACGGGTCAAATACCCGAATCGTTCTCGGGTTTCCCTGGATCCGCGTTTTCTCACAACCCGTCCCTCTGCGGAGCTCCCTTGCAAGAATGCATAGCCAAAGGCAAAAGCAGAAGCAAAGGCGAGGCAATCATCCCGGCCCTGGCTTCCCCATTGAAGCCGCGAAACGACACCGGTTTTTCCAAACCCCGCGGGCGGGAGAGAATAATGGGGGTGTTGGTCTTGGTGGGTATTGTGGTGGGGGACGTGCTGGTGCTGGCTTTGGTGTCGCTGCTTCTCTACTACTATTTCTGGAGGAACTACTCTGCTGCTGCACAATTGAGAAAAGAGGAAAAAGAGAGGAGGAGTTGGAAGACGGTGGATGAGTATAAGGGTGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGTTGCGTTCGTCGGCGGAGTTGTTGGGAAAAGGTGCGTTGGGGAGTGCCTATAAAGCCGTGCTTGACGACGGAACTGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGTGTTGGAGGGAAGAAGGAATTCCACCAACGAATGGAAGTGCTTGGAAGTTTGAGACACTCAAACGTTGTTAGTTTGAGGGCTTACTGTTTCACCAAAGACGACAAATTCCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCATTCCTTCTCCACGGTAATCGAGGACCAGGGCGGACCCCACTGGACTGGACAACGAGGTTGAAGATCGCAGCTGGAGCGGCACGAGGCGTGGCATTCATTCACAAACATAAACTCACCCATGGAAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAACGCGCGCGTCGCGGACTTTGGTCTCTCCATCTTCGCTGGCGCCTCCATTCTAAGATCCAACGGCTACCGGGCGCCAGAGGTATCGGACGGTCGCAAGCAGACACAGATGTCTGACGTGTACTCCTTTGGCGTCTTATTAATAGAGATGCTGACGGGGAAGTGCCCCTCCACCGTGGTGGATCTGCCCAGGTGGGTCCGGTCGGTTGGGAGAGAGGAGTGGACGGCCGAGGTATTCGATTTAGAACTGATGAGCTATAAGGACATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATCGAGTGCACTGAGACCGAACCTCATCAACGGCTCAAGATGAGCCACGTGGTGAAGATGATTGAGGAATTGCGTCGGGTCCAGATGTTGCCGTGTGATGAAGGGTTGGAATCGCTGTCTGGGTCACTCTCGATCCCTGAAGCAAGTCAATGA 1887 0.5432 MAMALASLPSPFLFLLTSIFMLLYLSLLTHSINPDFHPLMSFKAASDPSNNLAQWNSTTSDPCTWYGVSCLRNRVSRLVLQDLNLTGSIHPLTSLTQLRILSLKRNRLNGPITSLANLTALRLLFLSHNNFSGPFPATLTSLYRLDLSHNSLSGEIPPTFNRWTHLLTLRLDSNRFRGRIPSNINLSRLQDFNVSNNLLTGQIPESFSGFPGSAFSHNPSLCGAPLQECIAKGKSRSKGEAIIPALASPLKPRNDTGFSKPRGRERIMGVLVLVGIVVGDVLVLALVSLLLYYYFWRNYSAAAQLRKEEKERRSWKTVDEYKGDGMVFLEGVRRFELEELLRSSAELLGKGALGSAYKAVLDDGTVVAVKRLKEVSVGGKKEFHQRMEVLGSLRHSNVVSLRAYCFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNARVADFGLSIFAGASILRSNGYRAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSTVVDLPRWVRSVGREEWTAEVFDLELMSYKDIEEEMVALLQIAIECTETEPHQRLKMSHVVKMIEELRRVQMLPCDEGLESLSGSLSIPEASQ 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01667 628 SUPERFAMILY L domain-like 41 226 - -
Vian10g01667 628 Gene3D Phosphorylase Kinase; domain 1 313 417 - -
Vian10g01667 628 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Vian10g01667 628 Gene3D Transferase(Phosphotransferase) domain 1 418 611 - -
Vian10g01667 628 Gene3D Ribonuclease Inhibitor 141 229 IPR032675 -
Vian10g01667 628 ProSiteProfiles Protein kinase domain profile. 342 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g01667 628 SUPERFAMILY Protein kinase-like (PK-like) 345 599 IPR011009 -
Vian10g01667 628 Pfam Protein kinase domain 345 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian10g01667 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 604 IPR046959 -
Vian10g01667 628 Gene3D Ribonuclease Inhibitor 37 140 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01667 Vian-Chr10 27935697 27941166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01667 35 625 Receptor kinase-like Gene Family AT1G68400 58.962 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vian10g01667 Pkinase 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01667 - - vun:114168386 1055.43