Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g01599 ATGGGAAGGATGCCGTGCTGTGAGAAGGTAGGGTTGAAGAAAGGACGATGGACTCCAGAAGAAGACAGGAAGCTCCTCGACTACGTTCGGAAGCATGGTCATGGAAACTGGCGTTCAGTGCCTGCCAAAGCGGCAGCTCACCTGCCCCAAAGAACAGACAATGAGATCAAGAACTATTGGAATACCAACATCAAGAAAAGACTCATCAGAATGGGCTTAGATCCCATTACCCACAAAACAATTAAGCAGAACACGTTTGAACCCTTTGGTGTTGGCCATGACCAGTCCAAGGACACCACCAATATCAGCCACGTGGCTCAATGGGAGGGTGCTCGACTTGAAGCTGAAGCCAGAGGATCTCAGTTGCAAGTTATTGGATCCGGATCTTCGCAACTCTCTGGGCTAATTTTAAGCAAAATTCCAACTGAACCTTATCTTTCATCACATTCAGTGTCAACCGAAAACAACACAGCGTATAACATGTATGCCCTCGTGCTTGCCACAAATAATGATTTTCGGTCATCTGTATCCACTTTGAGCATTCCAATGCTTCCTGGTGTTTCTAATACTCCACATATCAGGAATAAGGAAAGTTCACTTTCATATAAGAGTGATAATAGTATCATGGGAGCTAGTGGCCAAAGTCAAAAGGAAATAGAAGGTTGGGTATCAAACTTACAATATGATATTGTGGTGGCTGTGGAAGCATTCAGAACAGCAAGGTCTGAGAGTATCGACGAGCTGTTTAATGAATACACTTCCATTTAG 768 0.4427 MGRMPCCEKVGLKKGRWTPEEDRKLLDYVRKHGHGNWRSVPAKAAAHLPQRTDNEIKNYWNTNIKKRLIRMGLDPITHKTIKQNTFEPFGVGHDQSKDTTNISHVAQWEGARLEAEARGSQLQVIGSGSSQLSGLILSKIPTEPYLSSHSVSTENNTAYNMYALVLATNNDFRSSVSTLSIPMLPGVSNTPHIRNKESSLSYKSDNSIMGASGQSQKEIEGWVSNLQYDIVVAVEAFRTARSESIDELFNEYTSI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g01599 255 Gene3D - 11 70 - -
Vian10g01599 255 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Vian10g01599 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Vian10g01599 255 SMART sant 13 66 IPR001005 -
Vian10g01599 255 CDD SANT 16 64 IPR001005 -
Vian10g01599 255 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Vian10g01599 255 PANTHER F14D16.11-RELATED 45 225 - -
Vian10g01599 255 SUPERFAMILY Homeodomain-like 8 73 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g01599 Vian-Chr10 26925500 26926457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g01599 1 118 MYB Transcription Factor Family AT5G15310 45.783 7.57e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vian10g01599 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g01599 K09422 - gmx:100790887 249.98